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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV002919
AY934371
206707
Gammaproteobacteria
GAT
Ile
>ENV002701
AY934248
207641
Gammaproteobacteria
GAT
Ile
>ENV002703
AY934249
207641
Gammaproteobacteria
GAT
Ile
>ENV002707
AY934251
207641
Gammaproteobacteria
GAT
Ile
>ENV002710
AY934253
207641
Gammaproteobacteria
GAT
Ile
>ENV002712
AY934254
207641
Gammaproteobacteria
GAT
Ile
>ENV002714
AY934255
207641
Gammaproteobacteria
GAT
Ile
>ENV002716
AY934256
207641
Gammaproteobacteria
GAT
Ile
>ENV002720
AY934258
207641
Gammaproteobacteria
GAT
Ile
>ENV002723
AY934260
207641
Gammaproteobacteria
GAT
Ile
>ENV002727
AY934262
207641
Gammaproteobacteria
GAT
Ile
>ENV002729
AY934263
207641
Gammaproteobacteria
GAT
Ile
>ENV002731
AY934264
207641
Gammaproteobacteria
GAT
Ile
>ENV002733
AY934265
207641
Gammaproteobacteria
GAT
Ile
>ENV002735
AY934266
207641
Gammaproteobacteria
GAT
Ile
>ENV002737
AY934267
207641
Gammaproteobacteria
GAT
Ile
>ENV002739
AY934268
207641
Gammaproteobacteria
GAT
Ile
>ENV002741
AY934269
207641
Gammaproteobacteria
GAT
Ile
>ENV002743
AY934270
207641
Gammaproteobacteria
GAT
Ile
>ENV002745
AY934271
207641
Gammaproteobacteria
GAT
Ile
>ENV002747
AY934272
207641
Gammaproteobacteria
GAT
Ile
>ENV002749
AY934273
207641
Gammaproteobacteria
GAT
Ile
>ENV002753
AY934275
207641
Gammaproteobacteria
GAT
Ile
>ENV002755
AY934276
207641
Gammaproteobacteria
GAT
Ile
>ENV002757
AY934277
207641
Gammaproteobacteria
GAT
Ile
>ENV002759
AY934278
207641
Gammaproteobacteria
GAT
Ile
>ENV002761
AY934279
207641
Gammaproteobacteria
GAT
Ile
>ENV002763
AY934280
207641
Gammaproteobacteria
GAT
Ile
>ENV002765
AY934281
207641
Gammaproteobacteria
GAT
Ile
>ENV002766
AY934282
207641
Gammaproteobacteria
GAT
Ile
>ENV002768
AY934283
207641
Gammaproteobacteria
GAT
Ile
>ENV002769
AY934284
207641
Gammaproteobacteria
GAT
Ile
>ENV002771
AY934285
207641
Gammaproteobacteria
GAT
Ile
>ENV002773
AY934286
207641
Gammaproteobacteria
GAT
Ile
>ENV002775
AY934288
207641
Gammaproteobacteria
GAT
Ile
>ENV002781
AY934293
207641
Gammaproteobacteria
GAT
Ile
>ENV002783
AY934294
207641
Gammaproteobacteria
GAT
Ile
>ENV002785
AY934295
207641
Gammaproteobacteria
GAT
Ile
>ENV002787
AY934296
207641
Gammaproteobacteria
GAT
Ile
>ENV002794
AY934300
207641
Gammaproteobacteria
GAT
Ile
>ENV002796
AY934301
207641
Gammaproteobacteria
GAT
Ile
>ENV002798
AY934302
207641
Gammaproteobacteria
GAT
Ile
>ENV002800
AY934303
207641
Gammaproteobacteria
GAT
Ile
>ENV002802
AY934304
207641
Gammaproteobacteria
GAT
Ile
>ENV002817
AY934312
207641
Gammaproteobacteria
GAT
Ile
>ENV002819
AY934313
207641
Gammaproteobacteria
GAT
Ile
>ENV002829
AY934319
207641
Gammaproteobacteria
GAT
Ile
>ENV002831
AY934320
207641
Gammaproteobacteria
GAT
Ile
>ENV002833
AY934321
207641
Gammaproteobacteria
GAT
Ile
>ENV002849
AY934330
207641
Gammaproteobacteria
GAT
Ile
>ENV002856
AY934334
207641
Gammaproteobacteria
GAT
Ile
>ENV002858
AY934335
207641
Gammaproteobacteria
GAT
Ile
>ENV002861
AY934337
207641
Gammaproteobacteria
GAT
Ile
>ENV002863
AY934338
207641
Gammaproteobacteria
GAT
Ile
>ENV002867
AY934340
207641
Gammaproteobacteria
GAT
Ile
>ENV002869
AY934341
207641
Gammaproteobacteria
GAT
Ile
>ENV002881
AY934348
207641
Gammaproteobacteria
GAT
Ile
>ENV002906
AY934364
207641
Gammaproteobacteria
GAT
Ile
>ENV002907
AY934365
207641
Gammaproteobacteria
GAT
Ile
>ENV002909
AY934366
207641
Gammaproteobacteria
GAT
Ile
>ENV002915
AY934369
207641
Gammaproteobacteria
GAT
Ile
>ENV002917
AY934370
207641
Gammaproteobacteria
GAT
Ile
>ENV002923
AY934373
207641
Gammaproteobacteria
GAT
Ile
>ENV002925
AY934374
207641
Gammaproteobacteria
GAT
Ile
>ENV002927
AY934375
207641
Gammaproteobacteria
GAT
Ile
>ENV002931
AY934377
207641
Gammaproteobacteria
GAT
Ile
>ENV002933
AY934378
207641
Gammaproteobacteria
GAT
Ile
>ENV002937
AY934380
207641
Gammaproteobacteria
GAT
Ile
>ENV002939
AY934381
207641
Gammaproteobacteria
GAT
Ile
>ENV002951
AY934388
207641
Gammaproteobacteria
GAT
Ile
>ENV002971
AY934400
207641
Gammaproteobacteria
GAT
Ile
>ENV003215
DQ009131
207641
Gammaproteobacteria
GAT
Ile
>ENV003765
DQ009451
207641
Gammaproteobacteria
GAT
Ile
>ENV003797
DQ009470
207641
Gammaproteobacteria
GAT
Ile
>ENV004259
DQ491460
207641
Gammaproteobacteria
GAT
Ile
>ENV002827
AY934317
312458
Gammaproteobacteria
TGC
Ala
>ENV002888
AY934351
312458
Gammaproteobacteria
TGC
Ala
>ENV001458
AY933346
258334
Gammaproteobacteria
TAC
Val
>ENV000316
AF268429
171800
Gammaproteobacteria
GAT
Ile
>ENV002303
AY934024
207635
Gammaproteobacteria
GAT
Ile
>ENV002304
AY934025
207635
Gammaproteobacteria
GAT
Ile
>ENV000059
AB236007
203391
Gammaproteobacteria
GAT
Ile
>ENV002809
AY934307
312456
Gammaproteobacteria
TGC
Ala
>ENV002811
AY934308
312456
Gammaproteobacteria
TGC
Ala
>ENV002813
AY934309
312456
Gammaproteobacteria
TGC
Ala
>ENV002816
AY934311
312456
Gammaproteobacteria
TGC
Ala
>ENV002823
AY934315
312456
Gammaproteobacteria
TGC
Ala
>ENV002842
AY934326
312456
Gammaproteobacteria
TGC
Ala
>ENV002844
AY934327
312456
Gammaproteobacteria
TGC
Ala
>ENV002884
AY934349
312456
Gammaproteobacteria
TGC
Ala
>ENV001310
AY627376
312307
Gammaproteobacteria
TGC
Ala
>ENV002472
AY934128
312307
Gammaproteobacteria
TGC
Ala
>ENV002893
AY934354
312307
Gammaproteobacteria
TGC
Ala
>ENV003800
DQ009471
312307
Gammaproteobacteria
TGC
Ala
>ENV002546
AY934168
207640
Gammaproteobacteria
GAT
Ile
>ENV002547
AY934169
207640
Gammaproteobacteria
GAT
Ile
>ENV002554
AY934173
207640
Gammaproteobacteria
GAT
Ile
>ENV002577
AY934185
207640
Gammaproteobacteria
GAT
Ile
>ENV002580
AY934187
207640
Gammaproteobacteria
GAT
Ile
>ENV002947
AY934385
207640
Gammaproteobacteria
GAT
Ile
>ENV000068
AB260935
112932
Gammaproteobacteria
GAG
Leu
>ENV002900
AY934359
188354
Gammaproteobacteria
GAT
Ile
>ENV002346
AY934048
159341
Gammaproteobacteria
GAT
Ile
>ENV002705
AY934250
159341
Gammaproteobacteria
GAT
Ile
>ENV002751
AY934274
159341
Gammaproteobacteria
GAT
Ile
>ENV002792
AY934299
159341
Gammaproteobacteria
GAT
Ile
>ENV002874
AY934344
159341
Gammaproteobacteria
GAT
Ile
>ENV004936
EF190084
260455
Gammaproteobacteria
TAC
Val
>ENV003818
DQ011248
272513
Gammaproteobacteria
>ENV001030
AY458641
278464
Gammaproteobacteria
>ENV002485
AY934135
278464
Gammaproteobacteria
>ENV002839
AY934325
170872
Gammaproteobacteria
GAT
Ile
>ENV000396
AF422523
207608
Gammaproteobacteria
GAT
Ile
>ENV000398
AF422526
207608
Gammaproteobacteria
GAT
Ile
>ENV001447
AY932826
207608
Gammaproteobacteria
GAT
Ile
>ENV002789
AY934297
207608
Gammaproteobacteria
GAT
Ile
>ENV002448
AY934107
261154
Gammaproteobacteria
TGC
Ala
>ENV002449
AY934108
261154
Gammaproteobacteria
TGC
Ala
>ENV003232
DQ009154
261154
Gammaproteobacteria
TGC
Ala
>ENV003233
DQ009155
261154
Gammaproteobacteria
TGC
Ala
>ENV003234
DQ009156
261154
Gammaproteobacteria
TGC
Ala
>ENV000723
AJ937675
312436
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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