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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170568515
FLMP01046293
146800
Bacteroidota
>WENV170567954
FLMP01011040
103368
Bacteroidota
CAA
Leu
>WENV170569193
FLMP01143288
162266
Bacteroidota
CAT
Met
>WENV170569007
FLMP01107149
147106
Bacteroidota
CAT
Met
>WENV170568699
FLMP01067721
290994
Bacteroidota
CAT
Met
>WENV170568280
FLMP01026949
290994
Bacteroidota
CAT
Met
>WENV170569923
FLMP01355006
235802
Bacteroidota
CAT
Met
>WENV170567956
FLMP01011056
235802
Bacteroidota
CAT
Met
>WENV170568138
FLMP01019086
145512
Bacteroidota
CAT
Met
>WENV170570178
FLMP01451611
240668
Bacteroidota
CAT
Met
>WENV170567592
FLMP01002186
145557
Bacteroidota
CAT
Met
>WENV170567916
FLMP01009976
148047
Bacteroidota
CAT
Met
>WENV170568771
FLMP01076397
341421
Bacteroidota
CCA
Trp
>WENV170568390
FLMP01035543
341421
Bacteroidota
CCA
Trp
>WENV170568937
FLMP01099961
306609
Bacteroidota
GAA
Phe
>WENV170569273
FLMP01161471
306609
Bacteroidota
GAA
Phe
>WENV170567710
FLMP01004030
235746
Bacteroidota
GAA
Phe
>WENV170567582
FLMP01002065
127458
Bacteroidota
GAC
Val
>WENV170567623
FLMP01002667
126712
Bacteroidota
GAC
Val
>WENV170568666
FLMP01062290
81938
Bacteroidota
GAG
Leu
>WENV170567728
FLMP01004438
159518
Bacteroidota
GAT
Ile
>WENV170569357
FLMP01178450
412944
Bacteroidota
GCA
Cys
>WENV170568484
FLMP01044045
238765
Bacteroidota
GCC
Gly
>WENV170567946
FLMP01010662
238765
Bacteroidota
GCC
Gly
>WENV170569823
FLMP01317900
342807
Bacteroidota
GCC
Gly
>WENV170569797
FLMP01306271
60611
Bacteroidota
GCT
Ser
>WENV170569167
FLMP01139615
60611
Bacteroidota
GCT
Ser
>WENV170569314
FLMP01166300
60695
Bacteroidota
GCT
Ser
>WENV170568772
FLMP01076651
45519
Bacteroidota
GGA
Ser
>WENV170569735
FLMP01284183
364423
Bacteroidota
GGT
Thr
>WENV170568546
FLMP01048952
349438
Bacteroidota
GGT
Thr
>WENV170568971
FLMP01103842
101289
Bacteroidota
GTA
Tyr
>WENV170567668
FLMP01003340
172532
Bacteroidota
GTC
Asp
>WENV170568809
FLMP01082033
185921
Bacteroidota
GTC
Asp
>WENV170570087
FLMP01414384
193473
Bacteroidota
GTC
Asp
>WENV170569903
FLMP01347608
193473
Bacteroidota
GTC
Asp
>WENV170567871
FLMP01008337
165001
Bacteroidota
GTT
Asn
>WENV170567551
FLMP01001756
197066
Bacteroidota
GTT
Asn
>WENV170570237
FLMP01479420
197066
Bacteroidota
GTT
Asn
>WENV170567948
FLMP01010756
190649
Bacteroidota
GTT
Asn
>WENV170569605
FLMP01246968
199382
Bacteroidota
GTT
Asn
>WENV170568411
FLMP01037729
127464
Bacteroidota
TAC
Val
>WENV170569790
FLMP01304644
136274
Bacteroidota
TAC
Val
>WENV170568825
FLMP01084343
127449
Bacteroidota
TAC
Val
>WENV170570317
FLMP01517275
110457
Bacteroidota
TAG
Leu
>WENV170569778
FLMP01299867
243344
Bacteroidota
TCC
Gly
>WENV170569964
FLMP01367882
322068
Bacteroidota
TCC
Gly
>WENV170569932
FLMP01357048
235935
Bacteroidota
TCC
Gly
>WENV170569848
FLMP01325159
235935
Bacteroidota
TCC
Gly
>WENV170568972
FLMP01103842
235935
Bacteroidota
TCC
Gly
>WENV170569799
FLMP01306271
176463
Bacteroidota
TCT
Arg
>WENV170569625
FLMP01252782
176463
Bacteroidota
TCT
Arg
>WENV170567449
FLMP01000592
176463
Bacteroidota
TCT
Arg
>WENV170570061
FLMP01404811
145408
Bacteroidota
TCT
Arg
>WENV170569334
FLMP01172333
145408
Bacteroidota
TCT
Arg
>WENV170569241
FLMP01155375
145408
Bacteroidota
TCT
Arg
>WENV170568217
FLMP01022751
145408
Bacteroidota
TCT
Arg
>WENV170567635
FLMP01002787
180185
Bacteroidota
TGC
Ala
>WENV170568299
FLMP01028134
139286
Bacteroidota
TGG
Pro
>WENV170569333
FLMP01172333
126691
Bacteroidota
TGG
Pro
>WENV170569169
FLMP01139615
126691
Bacteroidota
TGG
Pro
>WENV170569168
FLMP01139615
126691
Bacteroidota
TGG
Pro
>WENV170568719
FLMP01069856
126691
Bacteroidota
TGG
Pro
>WENV170568594
FLMP01053873
126691
Bacteroidota
TGG
Pro
>WENV170570173
FLMP01448636
127288
Bacteroidota
TGG
Pro
>WENV170569798
FLMP01306271
127288
Bacteroidota
TGG
Pro
>WENV170569240
FLMP01155375
127288
Bacteroidota
TGG
Pro
>WENV170569752
FLMP01288954
127414
Bacteroidota
TGG
Pro
>WENV170568892
FLMP01093341
145151
Bacteroidota
TGG
Pro
>WENV170568762
FLMP01075888
197220
Bacteroidota
TGT
Thr
>WENV170569378
FLMP01189334
338625
Bacteroidota
TTC
Glu
>WENV170570244
FLMP01482833
369129
Bacteroidota
TTC
Glu
>WENV170569034
FLMP01111673
341465
Bacteroidota
TTC
Glu
>WENV170568705
FLMP01068298
241347
Bacteroidota
TTG
Gln
>WENV170568171
FLMP01020690
241347
Bacteroidota
TTG
Gln
>WENV170569346
FLMP01175635
341187
Bacteroidota
TTG
Gln
>WENV170568758
FLMP01075602
236929
Bacteroidota
TTT
Lys
>WENV170568915
FLMP01097013
237360
Bacteroidota
TTT
Lys
>WENV170569738
FLMP01287165
309582
Bacteroidota
TTT
Lys
>WENV170568665
FLMP01062290
235936
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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