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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570988
FLOH01000048
481162
Actinomycetota
GCA
Cys
>WENV170570757
FLOH01000020
304751
Actinomycetota
GTT
Asn
>WENV170571826
FLOH01000328
304751
Actinomycetota
GTT
Asn
>WENV170572726
FLOH01001229
12350
Actinomycetota
GCT
Ser
>WENV170570418
FLOH01000004
164201
Actinomycetota
GTC
Asp
>WENV170572227
FLOH01000635
163692
Actinomycetota
CCA
Trp
>WENV170572611
FLOH01001021
163692
Actinomycetota
CCA
Trp
>WENV170571930
FLOH01000390
372184
Actinomycetota
GTT
Asn
>WENV170571979
FLOH01000428
372184
Actinomycetota
GTT
Asn
>WENV170572707
FLOH01001190
166452
Actinomycetota
>WENV170570446
FLOH01000004
262677
Actinomycetota
GCC
Gly
>WENV170572006
FLOH01000443
262677
Actinomycetota
GCC
Gly
>WENV170572065
FLOH01000508
267560
Actinomycetota
TGC
Ala
>WENV170572300
FLOH01000713
267560
Actinomycetota
TGC
Ala
>WENV170570783
FLOH01000022
105627
Actinomycetota
TAG
Leu
>WENV170570430
FLOH01000004
179687
Actinomycetota
CAT
Met
>WENV170572226
FLOH01000635
179687
Actinomycetota
CAT
Met
>WENV170572610
FLOH01001021
179687
Actinomycetota
CAT
Met
>WENV170570776
FLOH01000022
262713
Actinomycetota
TTC
Glu
>WENV170570751
FLOH01000020
194311
Actinomycetota
CAT
Met
>WENV170572806
FLOH01001317
194311
Actinomycetota
CAT
Met
>WENV170570415
FLOH01000004
374125
Actinomycetota
CCG
Arg
>WENV170572706
FLOH01001190
264930
Actinomycetota
GGC
Ala
>WENV170572426
FLOH01000850
163255
Actinomycetota
GTC
Asp
>WENV170572934
FLOH01001536
163255
Actinomycetota
GTC
Asp
>WENV170570748
FLOH01000020
263488
Actinomycetota
ACG
Arg
>WENV170572609
FLOH01001019
266883
Actinomycetota
ACG
Arg
>WENV170570752
FLOH01000020
259969
Actinomycetota
CTT
Lys
>WENV170572807
FLOH01001317
259969
Actinomycetota
CTT
Lys
>WENV170570738
FLOH01000020
49729
Actinomycetota
GGA
Ser
>WENV170572810
FLOH01001317
49729
Actinomycetota
GGA
Ser
>WENV170570417
FLOH01000004
262964
Actinomycetota
TTC
Glu
>WENV170570428
FLOH01000004
106141
Actinomycetota
GTA
Tyr
>WENV170572224
FLOH01000635
106141
Actinomycetota
GTA
Tyr
>WENV170570758
FLOH01000020
226114
Actinomycetota
>WENV170571827
FLOH01000328
226114
Actinomycetota
>WENV170570419
FLOH01000004
163945
Actinomycetota
GAA
Phe
>WENV170572980
FLOH01002026
50113
Actinomycetota
GAG
Leu
>WENV170572616
FLOH01001029
264935
Actinomycetota
GCC
Gly
>WENV170570737
FLOH01000020
304063
Actinomycetota
TTT
Lys
>WENV170570742
FLOH01000020
448107
Actinomycetota
CCC
Gly
>WENV170572687
FLOH01001159
448107
Actinomycetota
CCC
Gly
>WENV170572000
FLOH01000439
372643
Actinomycetota
CCG
Arg
>WENV170571900
FLOH01000366
5414
Actinomycetota
GCT
Ser
>WENV170570653
FLOH01000014
450097
Actinomycetota
CCC
Gly
>WENV170570425
FLOH01000004
89311
Actinomycetota
TGA
Ser
>WENV170572725
FLOH01001229
89311
Actinomycetota
TGA
Ser
>WENV170570759
FLOH01000020
225033
Actinomycetota
TAC
Val
>WENV170572776
FLOH01001291
225033
Actinomycetota
TAC
Val
>WENV170571747
FLOH01000288
262714
Actinomycetota
CCT
Arg
>WENV170572007
FLOH01000443
477620
Actinomycetota
GCA
Cys
>WENV170572617
FLOH01001029
477620
Actinomycetota
GCA
Cys
>WENV170572720
FLOH01001211
133242
Actinomycetota
TAG
Leu
>WENV170570735
FLOH01000020
475194
Actinomycetota
TCC
Gly
>WENV170571823
FLOH01000328
475194
Actinomycetota
TCC
Gly
>WENV170571104
FLOH01000071
267514
Actinomycetota
TGG
Pro
>WENV170571860
FLOH01000347
267514
Actinomycetota
TGG
Pro
>WENV170571939
FLOH01000400
267514
Actinomycetota
TGG
Pro
>WENV170572408
FLOH01000827
267514
Actinomycetota
TGG
Pro
>WENV170572425
FLOH01000850
267034
Actinomycetota
TTC
Glu
>WENV170572933
FLOH01001536
267034
Actinomycetota
TTC
Glu
>WENV170573014
FLOH01003674
267034
Actinomycetota
TTC
Glu
>WENV170571838
FLOH01000338
287082
Actinomycetota
GGT
Thr
>WENV170572984
FLOH01002117
287082
Actinomycetota
GGT
Thr
>WENV170571862
FLOH01000347
267014
Actinomycetota
GTT
Asn
>WENV170572628
FLOH01001047
372735
Actinomycetota
TAC
Val
>WENV170572831
FLOH01001362
459334
Actinomycetota
CCC
Gly
>WENV170570736
FLOH01000020
316758
Actinomycetota
CCG
Arg
>WENV170572651
FLOH01001118
316758
Actinomycetota
CCG
Arg
>WENV170570743
FLOH01000020
236280
Actinomycetota
GAT
Ile
>WENV170571902
FLOH01000366
26128
Actinomycetota
CGA
Ser
>WENV170570782
FLOH01000022
277601
Actinomycetota
GTG
His
>WENV170571402
FLOH01000149
277601
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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