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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571190
FLOH01000089
275643
Alphaproteobacteria
TTT
Lys
>WENV170572945
FLOH01001557
268994
Alphaproteobacteria
CCA
Trp
>WENV170572042
FLOH01000486
75752
Alphaproteobacteria
CAG
Leu
>WENV170571294
FLOH01000121
74611
Alphaproteobacteria
CAG
Leu
>WENV170572680
FLOH01001140
184235
Alphaproteobacteria
GTC
Asp
>WENV170571191
FLOH01000089
67505
Alphaproteobacteria
TAA
Leu
>WENV170571647
FLOH01000244
406362
Alphaproteobacteria
GAA
Phe
>WENV170572332
FLOH01000753
221183
Alphaproteobacteria
CGG
Pro
>WENV170572318
FLOH01000740
264419
Alphaproteobacteria
TTT
Lys
>WENV170571624
FLOH01000237
275454
Alphaproteobacteria
GGC
Ala
>WENV170571830
FLOH01000332
205335
Alphaproteobacteria
GGG
Pro
>WENV170571922
FLOH01000382
318054
Alphaproteobacteria
TAC
Val
>WENV170572444
FLOH01000874
275379
Alphaproteobacteria
CGC
Ala
>WENV170572143
FLOH01000559
477496
Alphaproteobacteria
GCA
Cys
>WENV170571036
FLOH01000058
307687
Alphaproteobacteria
GGC
Ala
>WENV170571045
FLOH01000059
307687
Alphaproteobacteria
GGC
Ala
>WENV170571321
FLOH01000131
307687
Alphaproteobacteria
GGC
Ala
>WENV170570787
FLOH01000024
26306
Alphaproteobacteria
TGA
Ser
>WENV170572648
FLOH01001107
26306
Alphaproteobacteria
TGA
Ser
>WENV170571368
FLOH01000140
233224
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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