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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570879
FLOH01000032
277731
Bacteroidota
>WENV170570458
FLOH01000005
315768
Bacteroidota
TCC
Gly
>WENV170571601
FLOH01000222
315768
Bacteroidota
TCC
Gly
>WENV170571983
FLOH01000431
165596
Bacteroidota
GGC
Ala
>WENV170572650
FLOH01001110
165596
Bacteroidota
GGC
Ala
>WENV170572046
FLOH01000495
369587
Bacteroidota
TTC
Glu
>WENV170572266
FLOH01000675
266737
Bacteroidota
TTT
Lys
>WENV170570915
FLOH01000037
108353
Bacteroidota
TAG
Leu
>WENV170570450
FLOH01000005
160922
Bacteroidota
GTG
His
>WENV170570451
FLOH01000005
57357
Bacteroidota
TGA
Ser
>WENV170570457
FLOH01000005
125527
Bacteroidota
GTA
Tyr
>WENV170570874
FLOH01000032
125527
Bacteroidota
GTA
Tyr
>WENV170572267
FLOH01000675
125527
Bacteroidota
GTA
Tyr
>WENV170572711
FLOH01001196
131028
Bacteroidota
CAA
Leu
>WENV170570912
FLOH01000037
268933
Bacteroidota
>WENV170570913
FLOH01000037
448301
Bacteroidota
>WENV170571618
FLOH01000232
153255
Bacteroidota
TGG
Pro
>WENV170572657
FLOH01001126
153255
Bacteroidota
TGG
Pro
>WENV170570467
FLOH01000005
167465
Bacteroidota
TCT
Arg
>WENV170571724
FLOH01000279
105473
Bacteroidota
TAG
Leu
>WENV170572366
FLOH01000786
258386
Bacteroidota
TTT
Lys
>WENV170570463
FLOH01000005
144149
Bacteroidota
TGG
Pro
>WENV170570466
FLOH01000005
144149
Bacteroidota
TGG
Pro
>WENV170571421
FLOH01000158
321470
Bacteroidota
GAA
Phe
>WENV170572625
FLOH01001041
321470
Bacteroidota
GAA
Phe
>WENV170570465
FLOH01000005
71400
Bacteroidota
GCT
Ser
>WENV170572656
FLOH01001126
71400
Bacteroidota
GCT
Ser
>WENV170572760
FLOH01001272
160459
Bacteroidota
GGC
Ala
>WENV170571829
FLOH01000330
149057
Bacteroidota
TAC
Val
>WENV170572142
FLOH01000558
369215
Bacteroidota
TTC
Glu
>WENV170572823
FLOH01001340
179763
Bacteroidota
GTG
His
>WENV170570760
FLOH01000021
390361
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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