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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571867
FLOH01000348
458420
Betaproteobacteria
GCA
Cys
>WENV170570858
FLOH01000030
322721
Betaproteobacteria
TAC
Val
>WENV170571800
FLOH01000307
322721
Betaproteobacteria
TAC
Val
>WENV170572077
FLOH01000513
322721
Betaproteobacteria
TAC
Val
>WENV170571811
FLOH01000316
449613
Betaproteobacteria
GCA
Cys
>WENV170570998
FLOH01000050
207610
Betaproteobacteria
GAT
Ile
>WENV170570857
FLOH01000030
108143
Betaproteobacteria
TAG
Leu
>WENV170571799
FLOH01000307
108143
Betaproteobacteria
TAG
Leu
>WENV170571394
FLOH01000147
310686
Betaproteobacteria
CCT
Arg
>WENV170571273
FLOH01000116
274074
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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