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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571225
FLOH01000102
477494
Gammaproteobacteria
TCC
Gly
>WENV170572698
FLOH01001174
49893
Gammaproteobacteria
GGA
Ser
>WENV170571679
FLOH01000259
108980
Gammaproteobacteria
TAG
Leu
>WENV170572744
FLOH01001250
61340
Gammaproteobacteria
GGA
Ser
>WENV170572485
FLOH01000922
161665
Gammaproteobacteria
CCG
Arg
>WENV170571226
FLOH01000102
275093
Gammaproteobacteria
GGT
Thr
>WENV170573032
FLOH01004386
161428
Gammaproteobacteria
CAT
Met
>WENV170573035
FLOH01004386
161428
Gammaproteobacteria
CAT
Met
>WENV170572752
FLOH01001257
229608
Gammaproteobacteria
CAT
Met
>WENV170570894
FLOH01000035
204541
Gammaproteobacteria
ACG
Arg
>WENV170572215
FLOH01000632
272540
Gammaproteobacteria
GTT
Asn
>WENV170571674
FLOH01000255
220559
Gammaproteobacteria
GTC
Asp
>WENV170571224
FLOH01000102
128911
Gammaproteobacteria
GTA
Tyr
>WENV170573073
FLOH01005530
91368
Gammaproteobacteria
CAG
Leu
>WENV170570926
FLOH01000040
107919
Gammaproteobacteria
TAG
Leu
>WENV170573033
FLOH01004386
107919
Gammaproteobacteria
TAG
Leu
>WENV170570927
FLOH01000040
290512
Gammaproteobacteria
TGT
Thr
>WENV170573055
FLOH01005108
262312
Gammaproteobacteria
TTC
Glu
>WENV170573056
FLOH01005108
262312
Gammaproteobacteria
TTC
Glu
>WENV170572701
FLOH01001178
454003
Gammaproteobacteria
GCA
Cys
>WENV170572217
FLOH01000632
263987
Gammaproteobacteria
TTT
Lys
>WENV170572218
FLOH01000632
263987
Gammaproteobacteria
TTT
Lys
>WENV170573011
FLOH01003609
376141
Gammaproteobacteria
TTG
Gln
>WENV170573012
FLOH01003609
376141
Gammaproteobacteria
TTG
Gln
>WENV170572229
FLOH01000640
107388
Gammaproteobacteria
TAG
Leu
>WENV170571732
FLOH01000285
90637
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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