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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170572360
FLOH01000772
163035
Nitrososphaerota
GGC
Ala
>WENV170570478
FLOH01000006
50246
Nitrososphaerota
TAG
Leu
>WENV170572965
FLOH01001749
50246
Nitrososphaerota
TAG
Leu
>WENV170570476
FLOH01000006
139337
Nitrososphaerota
CTC
Glu
>WENV170570470
FLOH01000006
172495
Nitrososphaerota
GGG
Pro
>WENV170570489
FLOH01000006
163034
Nitrososphaerota
GCC
Gly
>WENV170571874
FLOH01000351
139965
Nitrososphaerota
>WENV170570492
FLOH01000006
139339
Nitrososphaerota
GAT
Ile
>WENV170571872
FLOH01000351
139339
Nitrososphaerota
GAT
Ile
>WENV170570485
FLOH01000006
139336
Nitrososphaerota
GCG
Arg
>WENV170572954
FLOH01001583
139336
Nitrososphaerota
GCG
Arg
>WENV170572085
FLOH01000524
261940
Nitrososphaerota
TTG
Gln
>WENV170570482
FLOH01000006
163036
Nitrososphaerota
>WENV170572660
FLOH01001127
163036
Nitrososphaerota
>WENV170570490
FLOH01000006
371796
Nitrososphaerota
>WENV170571870
FLOH01000351
371796
Nitrososphaerota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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