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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005086
FLRT01108396
324257
Bacillota
CCA
Trp
>WENV180005172
FLRT01190255
160420
Bacillota
CAT
Met
>WENV180005104
FLRT01130831
163164
Bacillota
CAT
Met
>WENV180004998
FLRT01048225
159872
Bacillota
GAT
Ile
>WENV180005103
FLRT01130831
259279
Bacillota
GGT
Thr
>WENV180005171
FLRT01190255
259279
Bacillota
GGT
Thr
>WENV180005174
FLRT01191197
163160
Bacillota
GGG
Pro
>WENV180005112
FLRT01140919
269979
Bacillota
TAC
Val
>WENV180005105
FLRT01132138
163165
Bacillota
CGG
Pro
>WENV180005151
FLRT01178939
160421
Bacillota
TGG
Pro
>WENV180005034
FLRT01072580
293077
Bacillota
TTT
Lys
>WENV180004971
FLRT01028100
449433
Bacillota
CCC
Gly
>WENV180004963
FLRT01021563
371879
Bacillota
TTG
Gln
>WENV180005020
FLRT01061725
163166
Bacillota
ACG
Arg
>WENV180005179
FLRT01195328
105465
Bacillota
TAG
Leu
>WENV180005066
FLRT01097890
262075
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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