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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007619
FLSA01124231
107679
Actinomycetota
GTA
Tyr
>WENV180007714
FLSA01215643
107679
Actinomycetota
GTA
Tyr
>WENV180007576
FLSA01085969
178594
Actinomycetota
CAA
Leu
>WENV180007744
FLSA01246588
131029
Actinomycetota
CAA
Leu
>WENV180007470
FLSA01034041
106090
Actinomycetota
TAG
Leu
>WENV180007509
FLSA01048597
262342
Actinomycetota
CCA
Trp
>WENV180007469
FLSA01034041
260869
Actinomycetota
CTT
Lys
>WENV180007676
FLSA01176357
260869
Actinomycetota
CTT
Lys
>WENV180007312
FLSA01000240
290431
Actinomycetota
GCC
Gly
>WENV180007407
FLSA01014764
290431
Actinomycetota
GCC
Gly
>WENV180007476
FLSA01036286
290431
Actinomycetota
GCC
Gly
>WENV180007745
FLSA01253933
290431
Actinomycetota
GCC
Gly
>WENV180007320
FLSA01000405
288475
Actinomycetota
CTC
Glu
>WENV180007478
FLSA01036286
288475
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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