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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007741
FLSA01244954
159594
Bacteroidota
CAT
Met
>WENV180007361
FLSA01005227
380508
Bacteroidota
CCT
Arg
>WENV180007499
FLSA01046905
448371
Bacteroidota
>WENV180007613
FLSA01119481
369587
Bacteroidota
TTC
Glu
>WENV180007347
FLSA01003148
64922
Bacteroidota
CAA
Leu
>WENV180007542
FLSA01069100
453595
Bacteroidota
CTG
Gln
>WENV180007642
FLSA01139771
369584
Bacteroidota
GTG
His
>WENV180007378
FLSA01011145
144955
Bacteroidota
GGG
Pro
>WENV180007715
FLSA01216640
293796
Bacteroidota
CGG
Pro
>WENV180007643
FLSA01139910
26248
Bacteroidota
GCT
Ser
>WENV180007363
FLSA01005752
53123
Bacteroidota
TGA
Ser
>WENV180007487
FLSA01038034
277633
Bacteroidota
CTT
Lys
>WENV180007371
FLSA01007086
159413
Bacteroidota
>WENV180007625
FLSA01128862
159413
Bacteroidota
>WENV180007719
FLSA01220739
159413
Bacteroidota
>WENV180007339
FLSA01001747
19144
Bacteroidota
GGA
Ser
>WENV180007647
FLSA01149809
105283
Bacteroidota
TAG
Leu
>WENV180007426
FLSA01020546
18362
Bacteroidota
GGA
Ser
>WENV180007689
FLSA01188301
258395
Bacteroidota
TTT
Lys
>WENV180007369
FLSA01006324
448322
Bacteroidota
CCC
Gly
>WENV180007370
FLSA01006913
369490
Bacteroidota
CTC
Glu
>WENV180007444
FLSA01026476
285851
Bacteroidota
GCC
Gly
>WENV180007641
FLSA01139546
369590
Bacteroidota
CCT
Arg
>WENV180007565
FLSA01079490
41238
Bacteroidota
TAA
Leu
>WENV180007660
FLSA01160885
294312
Bacteroidota
CCA
Trp
>WENV180007422
FLSA01019631
142668
Bacteroidota
TAC
Val
>WENV180007445
FLSA01026500
142668
Bacteroidota
TAC
Val
>WENV180007343
FLSA01002434
258392
Bacteroidota
CCA
Trp
>WENV180007663
FLSA01165790
105933
Bacteroidota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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