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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574071
FLYM01003327
68890
Aquificota
GTA
Tyr
>WENV170574072
FLYM01003327
381972
Aquificota
TCC
Gly
>WENV170574073
FLYM01003327
277678
Aquificota
GGT
Thr
>WENV170574201
FLYM01013257
387618
Aquificota
>WENV170574100
FLYM01005628
177467
Aquificota
GAT
Ile
>WENV170574486
FLYM01046017
381968
Aquificota
CGT
Thr
>WENV170574270
FLYM01019962
8689
Aquificota
GCT
Ser
>WENV170574101
FLYM01005628
381965
Aquificota
TGC
Ala
>WENV170574188
FLYM01012234
381967
Aquificota
CGC
Ala
>WENV170574097
FLYM01005425
177469
Aquificota
TCT
Arg
>WENV170574269
FLYM01019962
68887
Aquificota
GAG
Leu
>WENV170574078
FLYM01003670
277670
Aquificota
GAA
Phe
>WENV170574505
FLYM01050011
19799
Aquificota
CGA
Ser
>WENV170574039
FLYM01000428
177470
Aquificota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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