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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180013665
FMSI01124357
306521
Cyanobacteriota
GGC
Ala
>WENV180013462
FMSI01086933
52262
Cyanobacteriota
GGA
Ser
>WENV180013244
FMSI01059232
109219
Cyanobacteriota
TAG
Leu
>WENV180013245
FMSI01059232
178024
Cyanobacteriota
GAC
Val
>WENV180012773
FMSI01019452
314365
Cyanobacteriota
CCA
Trp
>WENV180012896
FMSI01028462
4078
Cyanobacteriota
GCT
Ser
>WENV180012426
FMSI01000682
278859
Cyanobacteriota
CCG
Arg
>WENV180013105
FMSI01045693
290444
Cyanobacteriota
GTG
His
>WENV180012719
FMSI01015782
278856
Cyanobacteriota
>WENV180012887
FMSI01027829
109110
Cyanobacteriota
CAA
Leu
>WENV180013304
FMSI01065554
178646
Cyanobacteriota
TCT
Arg
>WENV180012772
FMSI01019452
178648
Cyanobacteriota
CCT
Arg
>WENV180013654
FMSI01121304
159041
Cyanobacteriota
GTC
Asp
>WENV180012816
FMSI01022071
107614
Cyanobacteriota
GTA
Tyr
>WENV180013445
FMSI01084587
29079
Cyanobacteriota
TGA
Ser
>WENV180012957
FMSI01034564
28902
Cyanobacteriota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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