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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180012822
FMSI01022490
258970
Deinococcota
CGC
Ala
>WENV180013578
FMSI01105825
105400
Deinococcota
TAG
Leu
>WENV180013608
FMSI01113325
13029
Deinococcota
CGA
Ser
>WENV180013564
FMSI01103635
8664
Deinococcota
GCT
Ser
>WENV180012924
FMSI01032425
258969
Deinococcota
TTT
Lys
>WENV180013042
FMSI01040714
258968
Deinococcota
CTT
Lys
>WENV180013033
FMSI01040015
65041
Deinococcota
CAA
Leu
>WENV180013224
FMSI01057444
160092
Deinococcota
GAC
Val
>WENV180013306
FMSI01065787
259376
Deinococcota
TGT
Thr
>WENV180013320
FMSI01067215
65039
Deinococcota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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