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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170576539
FRDC01000847
369662
Alphaproteobacteria
GGT
Thr
>WENV170576216
FRDC01000151
257661
Alphaproteobacteria
>WENV170576285
FRDC01000308
271426
Alphaproteobacteria
CGT
Thr
>WENV170576403
FRDC01000547
271426
Alphaproteobacteria
CGT
Thr
>WENV170576575
FRDC01000960
271426
Alphaproteobacteria
CGT
Thr
>WENV170576941
FRDC01002340
114361
Alphaproteobacteria
GTA
Tyr
>WENV170576900
FRDC01002086
105279
Alphaproteobacteria
GAG
Leu
>WENV170577088
FRDC01003082
160383
Alphaproteobacteria
CCG
Arg
>WENV170577251
FRDC01004238
160383
Alphaproteobacteria
CCG
Arg
>WENV170576522
FRDC01000799
159546
Alphaproteobacteria
TGG
Pro
>WENV170576199
FRDC01000075
39753
Alphaproteobacteria
TGA
Ser
>WENV170576222
FRDC01000167
39753
Alphaproteobacteria
TGA
Ser
>WENV170577026
FRDC01002814
448356
Alphaproteobacteria
GCA
Cys
>WENV170577373
FRDC01004987
260431
Alphaproteobacteria
CGT
Thr
>WENV170576540
FRDC01000847
396032
Alphaproteobacteria
TTG
Gln
>WENV170576374
FRDC01000491
448412
Alphaproteobacteria
CTG
Gln
>WENV170577277
FRDC01004295
162070
Alphaproteobacteria
TGG
Pro
>WENV170576982
FRDC01002537
382620
Alphaproteobacteria
GCC
Gly
>WENV170576748
FRDC01001675
179274
Alphaproteobacteria
CAT
Met
>WENV170576376
FRDC01000492
158626
Alphaproteobacteria
TCT
Arg
>WENV170576483
FRDC01000695
158626
Alphaproteobacteria
TCT
Arg
>WENV170577028
FRDC01002814
31181
Alphaproteobacteria
TGA
Ser
>WENV170576885
FRDC01002003
236538
Alphaproteobacteria
GAT
Ile
>WENV170577372
FRDC01004987
259352
Alphaproteobacteria
CGC
Ala
>WENV170576739
FRDC01001637
105299
Alphaproteobacteria
CAA
Leu
>WENV170576219
FRDC01000151
39261
Alphaproteobacteria
CGA
Ser
>WENV170576277
FRDC01000291
39261
Alphaproteobacteria
CGA
Ser
>WENV170577366
FRDC01004917
403408
Alphaproteobacteria
TTG
Gln
>WENV170577012
FRDC01002721
311920
Alphaproteobacteria
CCA
Trp
>WENV170576278
FRDC01000293
108406
Alphaproteobacteria
TAG
Leu
>WENV170576929
FRDC01002279
108406
Alphaproteobacteria
TAG
Leu
>WENV170577029
FRDC01002814
317464
Alphaproteobacteria
TTT
Lys
>WENV170577313
FRDC01004414
114529
Alphaproteobacteria
CAG
Leu
>WENV170576231
FRDC01000194
39284
Alphaproteobacteria
GCT
Ser
>WENV170576291
FRDC01000339
467008
Alphaproteobacteria
GCA
Cys
>WENV170576449
FRDC01000615
467008
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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