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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016674
FSVS01000694
260069
Actinomycetota
ACG
Arg
>WENV180016661
FSVS01000332
262365
Actinomycetota
CCT
Arg
>WENV180016666
FSVS01000450
260077
Actinomycetota
>WENV180016664
FSVS01000432
270166
Actinomycetota
GGT
Thr
>WENV180016673
FSVS01000690
270166
Actinomycetota
GGT
Thr
>WENV180016670
FSVS01000474
189339
Actinomycetota
>WENV180016667
FSVS01000450
280320
Actinomycetota
GTT
Asn
>WENV180016663
FSVS01000429
174832
Actinomycetota
TGT
Thr
>WENV180016679
FSVS01000954
160679
Actinomycetota
GAA
Phe
>WENV180016669
FSVS01000462
267037
Actinomycetota
GGC
Ala
>WENV180016657
FSVS01000086
88940
Actinomycetota
GAG
Leu
>WENV180016676
FSVS01000793
88940
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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