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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180017026
FSWJ01000567
167857
Actinomycetota
GGC
Ala
>WENV180017025
FSWJ01000567
158362
Actinomycetota
TGG
Pro
>WENV180017034
FSWJ01000677
50054
Actinomycetota
>WENV180016981
FSWJ01000161
266329
Actinomycetota
TTT
Lys
>WENV180016969
FSWJ01000081
256995
Actinomycetota
CGC
Ala
>WENV180017013
FSWJ01000454
65352
Actinomycetota
CAG
Leu
>WENV180017010
FSWJ01000442
225981
Actinomycetota
TGT
Thr
>WENV180017011
FSWJ01000442
260796
Actinomycetota
TTT
Lys
>WENV180017061
FSWJ01001107
41395
Actinomycetota
GAG
Leu
>WENV180017019
FSWJ01000481
259969
Actinomycetota
CTT
Lys
>WENV180017003
FSWJ01000398
49729
Actinomycetota
GGA
Ser
>WENV180017024
FSWJ01000567
455858
Actinomycetota
TCC
Gly
>WENV180016970
FSWJ01000083
27648
Actinomycetota
CGA
Ser
>WENV180017007
FSWJ01000429
376466
Actinomycetota
TTG
Gln
>WENV180017018
FSWJ01000476
376466
Actinomycetota
TTG
Gln
>WENV180017012
FSWJ01000453
448022
Actinomycetota
CCC
Gly
>WENV180016976
FSWJ01000120
369064
Actinomycetota
GAC
Val
>WENV180016980
FSWJ01000156
257720
Actinomycetota
CTT
Lys
>WENV180016977
FSWJ01000124
267014
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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