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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180017676
FSXL01000630
167857
Actinomycetota
GGC
Ala
>WENV180017652
FSXL01000295
257001
Actinomycetota
TAC
Val
>WENV180017680
FSXL01000695
316020
Actinomycetota
CGT
Thr
>WENV180017649
FSXL01000255
260056
Actinomycetota
CTC
Glu
>WENV180017672
FSXL01000592
260055
Actinomycetota
ACG
Arg
>WENV180017643
FSXL01000180
369061
Actinomycetota
CTG
Gln
>WENV180017640
FSXL01000116
105048
Actinomycetota
TAG
Leu
>WENV180017683
FSXL01000735
260795
Actinomycetota
GTT
Asn
>WENV180017641
FSXL01000119
257378
Actinomycetota
CGT
Thr
>WENV180017673
FSXL01000596
257378
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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