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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020380
FTCZ01002410
258481
Alphaproteobacteria
>WENV180020612
FTCZ01007279
258481
Alphaproteobacteria
>WENV180020529
FTCZ01005548
371094
Alphaproteobacteria
TTC
Glu
>WENV180020413
FTCZ01003203
159546
Alphaproteobacteria
TGG
Pro
>WENV180020635
FTCZ01007740
162999
Alphaproteobacteria
>WENV180020329
FTCZ01001600
376279
Alphaproteobacteria
CAT
Met
>WENV180020278
FTCZ01000908
272697
Alphaproteobacteria
GAA
Phe
>WENV180020438
FTCZ01003916
272697
Alphaproteobacteria
GAA
Phe
>WENV180020369
FTCZ01002187
269354
Alphaproteobacteria
GTG
His
>WENV180020325
FTCZ01001597
370393
Alphaproteobacteria
TTT
Lys
>WENV180020382
FTCZ01002510
188620
Alphaproteobacteria
TGG
Pro
>WENV180020662
FTCZ01008030
66417
Alphaproteobacteria
GAG
Leu
>WENV180020411
FTCZ01003154
68639
Alphaproteobacteria
CAA
Leu
>WENV180020675
FTCZ01008208
68639
Alphaproteobacteria
CAA
Leu
>WENV180020530
FTCZ01005552
184235
Alphaproteobacteria
GTC
Asp
>WENV180020419
FTCZ01003371
169447
Alphaproteobacteria
CCT
Arg
>WENV180020416
FTCZ01003289
158626
Alphaproteobacteria
TCT
Arg
>WENV180020402
FTCZ01002981
160554
Alphaproteobacteria
GGG
Pro
>WENV180020640
FTCZ01007798
105152
Alphaproteobacteria
CAA
Leu
>WENV180020220
FTCZ01000071
171201
Alphaproteobacteria
GTG
His
>WENV180020246
FTCZ01000533
33052
Alphaproteobacteria
CGA
Ser
>WENV180020347
FTCZ01001915
109016
Alphaproteobacteria
CAA
Leu
>WENV180020601
FTCZ01007100
277573
Alphaproteobacteria
CTT
Lys
>WENV180020616
FTCZ01007378
277573
Alphaproteobacteria
CTT
Lys
>WENV180020583
FTCZ01006617
12896
Alphaproteobacteria
GCT
Ser
>WENV180020228
FTCZ01000228
159676
Alphaproteobacteria
GGG
Pro
>WENV180020244
FTCZ01000470
159676
Alphaproteobacteria
GGG
Pro
>WENV180020315
FTCZ01001448
261080
Alphaproteobacteria
TGT
Thr
>WENV180020533
FTCZ01005642
159678
Alphaproteobacteria
GTG
His
>WENV180020625
FTCZ01007602
159678
Alphaproteobacteria
GTG
His
>WENV180020469
FTCZ01004413
179904
Alphaproteobacteria
CGG
Pro
>WENV180020497
FTCZ01004884
26267
Alphaproteobacteria
TGA
Ser
>WENV180020270
FTCZ01000835
184032
Alphaproteobacteria
TCT
Arg
>WENV180020678
FTCZ01008224
184032
Alphaproteobacteria
TCT
Arg
>WENV180020421
FTCZ01003425
160317
Alphaproteobacteria
CCA
Trp
>WENV180020535
FTCZ01005644
160317
Alphaproteobacteria
CCA
Trp
>WENV180020562
FTCZ01006150
160317
Alphaproteobacteria
CCA
Trp
>WENV180020569
FTCZ01006290
160317
Alphaproteobacteria
CCA
Trp
>WENV180020370
FTCZ01002187
109156
Alphaproteobacteria
TAG
Leu
>WENV180020571
FTCZ01006300
275145
Alphaproteobacteria
TGT
Thr
>WENV180020231
FTCZ01000282
177372
Alphaproteobacteria
TGG
Pro
>WENV180020223
FTCZ01000094
377106
Alphaproteobacteria
GTT
Asn
>WENV180020345
FTCZ01001846
374583
Alphaproteobacteria
TTC
Glu
>WENV180020324
FTCZ01001551
266921
Alphaproteobacteria
GGC
Ala
>WENV180020293
FTCZ01001250
452458
Alphaproteobacteria
CTG
Gln
>WENV180020406
FTCZ01003022
266920
Alphaproteobacteria
CGT
Thr
>WENV180020460
FTCZ01004220
266920
Alphaproteobacteria
CGT
Thr
>WENV180020371
FTCZ01002187
374828
Alphaproteobacteria
TAC
Val
>WENV180020217
FTCZ01000048
19928
Alphaproteobacteria
GGA
Ser
>WENV180020538
FTCZ01005686
108406
Alphaproteobacteria
TAG
Leu
>WENV180020637
FTCZ01007753
105095
Alphaproteobacteria
TAG
Leu
>WENV180020499
FTCZ01004947
160042
Alphaproteobacteria
CAT
Met
>WENV180020570
FTCZ01006292
262836
Alphaproteobacteria
TAC
Val
>WENV180020552
FTCZ01005977
26615
Alphaproteobacteria
TGA
Ser
>WENV180020585
FTCZ01006637
26615
Alphaproteobacteria
TGA
Ser
>WENV180020641
FTCZ01007805
26615
Alphaproteobacteria
TGA
Ser
>WENV180020262
FTCZ01000835
453947
Alphaproteobacteria
GCA
Cys
>WENV180020338
FTCZ01001672
166369
Alphaproteobacteria
>WENV180020609
FTCZ01007220
166369
Alphaproteobacteria
>WENV180020620
FTCZ01007501
448086
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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