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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023457
FTHY01000200
260069
Actinomycetota
ACG
Arg
>WENV180023495
FTHY01001711
260069
Actinomycetota
ACG
Arg
>WENV180023496
FTHY01001711
260069
Actinomycetota
ACG
Arg
>WENV180023475
FTHY01000823
26468
Actinomycetota
CGA
Ser
>WENV180023526
FTHY01010874
26468
Actinomycetota
CGA
Ser
>WENV180023506
FTHY01002478
391752
Actinomycetota
TAC
Val
>WENV180023516
FTHY01006676
19515
Actinomycetota
TGA
Ser
>WENV180023460
FTHY01000255
267560
Actinomycetota
TGC
Ala
>WENV180023459
FTHY01000255
185340
Actinomycetota
GAT
Ile
>WENV180023493
FTHY01001513
260074
Actinomycetota
TTT
Lys
>WENV180023549
FTHY01105213
19522
Actinomycetota
TGA
Ser
>WENV180023485
FTHY01001181
448771
Actinomycetota
TCC
Gly
>WENV180023501
FTHY01002308
161151
Actinomycetota
GTC
Asp
>WENV180023503
FTHY01002380
161151
Actinomycetota
GTC
Asp
>WENV180023474
FTHY01000797
270166
Actinomycetota
GGT
Thr
>WENV180023524
FTHY01009543
270166
Actinomycetota
GGT
Thr
>WENV180023480
FTHY01001028
370544
Actinomycetota
GCA
Cys
>WENV180023523
FTHY01009232
448178
Actinomycetota
CCC
Gly
>WENV180023502
FTHY01002380
261993
Actinomycetota
TTC
Glu
>WENV180023478
FTHY01000952
189339
Actinomycetota
>WENV180023466
FTHY01000434
193512
Actinomycetota
TGT
Thr
>WENV180023455
FTHY01000073
261649
Actinomycetota
TCT
Arg
>WENV180023505
FTHY01002384
189013
Actinomycetota
CGC
Ala
>WENV180023468
FTHY01000544
291814
Actinomycetota
CCT
Arg
>WENV180023515
FTHY01006354
260427
Actinomycetota
CCA
Trp
>WENV180023486
FTHY01001181
161156
Actinomycetota
TGG
Pro
>WENV180023504
FTHY01002380
158596
Actinomycetota
GAA
Phe
>WENV180023494
FTHY01001711
6105
Actinomycetota
GCT
Ser
>WENV180023510
FTHY01004319
453053
Actinomycetota
TTG
Gln
>WENV180023467
FTHY01000485
267037
Actinomycetota
GGC
Ala
>WENV180023488
FTHY01001376
267037
Actinomycetota
GGC
Ala
>WENV180023489
FTHY01001376
267037
Actinomycetota
GGC
Ala
>WENV180023479
FTHY01000965
382490
Actinomycetota
CCG
Arg
>WENV180023476
FTHY01000952
260076
Actinomycetota
GTT
Asn
>WENV180023477
FTHY01000952
260076
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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