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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180026499
FTIU01000210
377810
Betaproteobacteria
CAC
Val
>WENV180026492
FTIU01000112
306898
Betaproteobacteria
GTT
Asn
>WENV180026749
FTIU01077998
306898
Betaproteobacteria
GTT
Asn
>WENV180026630
FTIU01006280
272442
Betaproteobacteria
TGT
Thr
>WENV180026504
FTIU01000389
279206
Betaproteobacteria
CTT
Lys
>WENV180026646
FTIU01009552
279206
Betaproteobacteria
CTT
Lys
>WENV180026642
FTIU01008399
19680
Betaproteobacteria
GGA
Ser
>WENV180026503
FTIU01000384
108996
Betaproteobacteria
CAG
Leu
>WENV180026527
FTIU01001320
108996
Betaproteobacteria
CAG
Leu
>WENV180026665
FTIU01014362
108996
Betaproteobacteria
CAG
Leu
>WENV180026543
FTIU01001958
290367
Betaproteobacteria
TTC
Glu
>WENV180026703
FTIU01029133
290367
Betaproteobacteria
TTC
Glu
>WENV180026757
FTIU01087381
105127
Betaproteobacteria
CAA
Leu
>WENV180026707
FTIU01033320
161402
Betaproteobacteria
CAT
Met
>WENV180026848
FTIU01289700
167468
Betaproteobacteria
>WENV180026635
FTIU01007073
158809
Betaproteobacteria
TGG
Pro
>WENV180026641
FTIU01008340
67558
Betaproteobacteria
TAG
Leu
>WENV180026559
FTIU01002697
378396
Betaproteobacteria
CCC
Gly
>WENV180026662
FTIU01013943
2583
Betaproteobacteria
>WENV180026654
FTIU01010985
158966
Betaproteobacteria
TCT
Arg
>WENV180026653
FTIU01010715
280460
Betaproteobacteria
TTT
Lys
>WENV180026506
FTIU01000487
65009
Betaproteobacteria
TAA
Leu
>WENV180026839
FTIU01274563
448663
Betaproteobacteria
GCA
Cys
>WENV180026501
FTIU01000292
452096
Betaproteobacteria
CCC
Gly
>WENV180026716
FTIU01038733
19235
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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