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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180027910
FTIZ01248736
211957
Alphaproteobacteria
GAT
Ile
>WENV180027935
FTIZ01300543
259737
Alphaproteobacteria
GAA
Phe
>WENV180027920
FTIZ01264922
311854
Alphaproteobacteria
TTT
Lys
>WENV180027815
FTIZ01115560
318945
Alphaproteobacteria
TGC
Ala
>WENV180027911
FTIZ01248736
318945
Alphaproteobacteria
TGC
Ala
>WENV180027458
FTIZ01000071
277573
Alphaproteobacteria
CTT
Lys
>WENV180027513
FTIZ01002313
277573
Alphaproteobacteria
CTT
Lys
>WENV180028104
FTIZ01751720
277573
Alphaproteobacteria
CTT
Lys
>WENV180027983
FTIZ01413294
159676
Alphaproteobacteria
GGG
Pro
>WENV180027871
FTIZ01191782
208854
Alphaproteobacteria
GTC
Asp
>WENV180027606
FTIZ01007270
451387
Alphaproteobacteria
TCC
Gly
>WENV180027491
FTIZ01001100
259573
Alphaproteobacteria
>WENV180027776
FTIZ01077980
259573
Alphaproteobacteria
>WENV180027882
FTIZ01205859
266921
Alphaproteobacteria
GGC
Ala
>WENV180027496
FTIZ01001385
160042
Alphaproteobacteria
CAT
Met
>WENV180027924
FTIZ01280764
160042
Alphaproteobacteria
CAT
Met
>WENV180027944
FTIZ01327110
160042
Alphaproteobacteria
CAT
Met
>WENV180027973
FTIZ01393419
160042
Alphaproteobacteria
CAT
Met
>WENV180027840
FTIZ01153248
376350
Alphaproteobacteria
GTT
Asn
>WENV180027576
FTIZ01004830
39284
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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