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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029666
FTJL01000021
377810
Betaproteobacteria
CAC
Val
>WENV180029675
FTJL01000201
279206
Betaproteobacteria
CTT
Lys
>WENV180029906
FTJL01017636
19680
Betaproteobacteria
GGA
Ser
>WENV180030134
FTJL01204371
316013
Betaproteobacteria
TGT
Thr
>WENV180030158
FTJL01237371
229587
Betaproteobacteria
GAT
Ile
>WENV180029998
FTJL01054593
26190
Betaproteobacteria
CGA
Ser
>WENV180029958
FTJL01034493
290367
Betaproteobacteria
TTC
Glu
>WENV180029884
FTJL01011982
161402
Betaproteobacteria
CAT
Met
>WENV180029731
FTJL01002358
158809
Betaproteobacteria
TGG
Pro
>WENV180029942
FTJL01029164
67558
Betaproteobacteria
TAG
Leu
>WENV180030257
FTJL01461858
374778
Betaproteobacteria
CAC
Val
>WENV180029732
FTJL01002358
158966
Betaproteobacteria
TCT
Arg
>WENV180030316
FTJL01688462
65009
Betaproteobacteria
TAA
Leu
>WENV180029871
FTJL01010916
448663
Betaproteobacteria
GCA
Cys
>WENV180029704
FTJL01001150
452096
Betaproteobacteria
CCC
Gly
>WENV180030100
FTJL01157499
22269
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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