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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180030329
FTJM01000158
167827
Actinomycetota
>WENV180030337
FTJM01000308
374437
Actinomycetota
CTG
Gln
>WENV180030436
FTJM01020108
49758
Actinomycetota
GGA
Ser
>WENV180030423
FTJM01010498
65164
Actinomycetota
CAA
Leu
>WENV180030330
FTJM01000206
277643
Actinomycetota
CTT
Lys
>WENV180030442
FTJM01026862
259535
Actinomycetota
GTT
Asn
>WENV180030542
FTJM01379583
53863
Actinomycetota
GGA
Ser
>WENV180030350
FTJM01000510
185321
Actinomycetota
CAT
Met
>WENV180030333
FTJM01000245
258110
Actinomycetota
GCC
Gly
>WENV180030407
FTJM01004218
160679
Actinomycetota
GAA
Phe
>WENV180030505
FTJM01142125
369457
Actinomycetota
TAC
Val
>WENV180030328
FTJM01000116
314928
Actinomycetota
CGT
Thr
>WENV180030484
FTJM01086032
69153
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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