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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646343
JQGR01000051
129948
Alphaproteobacteria
>WENV170646342
JQGR01000049
159552
Alphaproteobacteria
TGG
Pro
>WENV170646336
JQGR01000029
26668
Alphaproteobacteria
GCT
Ser
>WENV170646505
JQGR01016641
377684
Alphaproteobacteria
TCC
Gly
>WENV170646347
JQGR01000071
159287
Alphaproteobacteria
CGG
Pro
>WENV170646474
JQGR01011346
292580
Alphaproteobacteria
TTT
Lys
>WENV170646329
JQGR01000014
98017
Alphaproteobacteria
CAA
Leu
>WENV170646330
JQGR01000016
34180
Alphaproteobacteria
CGA
Ser
>WENV170646332
JQGR01000020
258840
Alphaproteobacteria
GGC
Ala
>WENV170646366
JQGR01000243
452081
Alphaproteobacteria
CCC
Gly
>WENV170646339
JQGR01000040
67540
Alphaproteobacteria
TAA
Leu
>WENV170646346
JQGR01000064
178359
Alphaproteobacteria
GTG
His
>WENV170646355
JQGR01000134
201901
Alphaproteobacteria
CAT
Met
>WENV170646327
JQGR01000011
75231
Alphaproteobacteria
CAG
Leu
>WENV170646364
JQGR01000182
159966
Alphaproteobacteria
ACG
Arg
>WENV170646358
JQGR01000167
26306
Alphaproteobacteria
TGA
Ser
>WENV170646331
JQGR01000018
258842
Alphaproteobacteria
CGT
Thr
>WENV170646348
JQGR01000073
139123
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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