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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653378
JRYI01129305
259737
Alphaproteobacteria
GAA
Phe
>WENV170653154
JRYI01008046
160383
Alphaproteobacteria
CCG
Arg
>WENV170653347
JRYI01091915
159546
Alphaproteobacteria
TGG
Pro
>WENV170653224
JRYI01023250
448356
Alphaproteobacteria
GCA
Cys
>WENV170653019
JRYI01000879
260431
Alphaproteobacteria
CGT
Thr
>WENV170653210
JRYI01018561
378450
Alphaproteobacteria
GTT
Asn
>WENV170653091
JRYI01002863
114633
Alphaproteobacteria
TAG
Leu
>WENV170653244
JRYI01031268
461210
Alphaproteobacteria
CTG
Gln
>WENV170653036
JRYI01001175
374142
Alphaproteobacteria
TTG
Gln
>WENV170653166
JRYI01009083
165995
Alphaproteobacteria
GTC
Asp
>WENV170653274
JRYI01042384
260949
Alphaproteobacteria
>WENV170653003
JRYI01000556
36886
Alphaproteobacteria
GGA
Ser
>WENV170653184
JRYI01013612
369560
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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