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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653173
JRYI01010809
461428
Betaproteobacteria
GCA
Cys
>WENV170653082
JRYI01002626
109307
Betaproteobacteria
GAG
Leu
>WENV170653226
JRYI01024372
5626
Betaproteobacteria
GCT
Ser
>WENV170653241
JRYI01030513
322721
Betaproteobacteria
TAC
Val
>WENV170653203
JRYI01016120
290835
Betaproteobacteria
CTT
Lys
>WENV170653193
JRYI01015608
19593
Betaproteobacteria
GGA
Ser
>WENV170653257
JRYI01034275
89774
Betaproteobacteria
TAG
Leu
>WENV170653027
JRYI01000927
322027
Betaproteobacteria
GAA
Phe
>WENV170653196
JRYI01015693
21944
Betaproteobacteria
GGA
Ser
>WENV170653100
JRYI01003350
260330
Betaproteobacteria
TTT
Lys
>WENV170652968
JRYI01000086
19183
Betaproteobacteria
GGA
Ser
>WENV170653287
JRYI01049640
381826
Betaproteobacteria
CCC
Gly
>WENV170653158
JRYI01008529
71616
Betaproteobacteria
CAA
Leu
>WENV170653136
JRYI01006043
270646
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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