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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170661114
JXWU01108157
304214
Euryarchaeota
GTC
Asp
>WENV170661181
JXWU01122968
147425
Euryarchaeota
GAA
Phe
>WENV170660834
JXWU01042249
53901
Euryarchaeota
GAG
Leu
>WENV170661222
JXWU01134225
53901
Euryarchaeota
GAG
Leu
>WENV170661105
JXWU01105255
412309
Euryarchaeota
TCC
Gly
>WENV170661212
JXWU01131780
412317
Euryarchaeota
CCC
Gly
>WENV170660873
JXWU01051527
127043
Euryarchaeota
CTC
Glu
>WENV170661106
JXWU01105901
134549
Euryarchaeota
GAC
Val
>WENV170661120
JXWU01108882
254419
Euryarchaeota
CCT
Arg
>WENV170660966
JXWU01071706
266487
Euryarchaeota
GTC
Asp
>WENV170660938
JXWU01064981
59254
Euryarchaeota
CAA
Leu
>WENV170660867
JXWU01049732
147432
Euryarchaeota
TGT
Thr
>WENV170661038
JXWU01087921
339760
Euryarchaeota
CGC
Ala
>WENV170661061
JXWU01092089
139939
Euryarchaeota
GAC
Val
>WENV170661261
JXWU01145634
238108
Euryarchaeota
TGG
Pro
>WENV170660829
JXWU01040692
238108
Euryarchaeota
TGG
Pro
>WENV170661006
JXWU01081542
237986
Euryarchaeota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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