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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170672924
LAZR01003238
206824
Bacteroidota
GGC
Ala
>WENV170672534
LAZR01000257
117444
Bacteroidota
GTA
Tyr
>WENV170672162
LAZR01000011
448526
Bacteroidota
TTG
Gln
>WENV170672407
LAZR01000124
105453
Bacteroidota
TAG
Leu
>WENV170672650
LAZR01000592
105453
Bacteroidota
TAG
Leu
>WENV170672256
LAZR01000038
160350
Bacteroidota
CAT
Met
>WENV170672335
LAZR01000063
145892
Bacteroidota
TAC
Val
>WENV170672170
LAZR01000016
258742
Bacteroidota
TTT
Lys
>WENV170672262
LAZR01000041
12157
Bacteroidota
GCT
Ser
>WENV170672872
LAZR01002864
138865
Bacteroidota
>WENV170672257
LAZR01000038
160922
Bacteroidota
GTG
His
>WENV170672377
LAZR01000087
57357
Bacteroidota
TGA
Ser
>WENV170672171
LAZR01000016
67292
Bacteroidota
GAG
Leu
>WENV170672980
LAZR01003965
290455
Bacteroidota
TTT
Lys
>WENV170673650
LAZR01020873
170035
Bacteroidota
GTT
Asn
>WENV170673000
LAZR01004504
171098
Bacteroidota
>WENV170672336
LAZR01000063
139057
Bacteroidota
GAC
Val
>WENV170672871
LAZR01002864
21732
Bacteroidota
GCT
Ser
>WENV170672937
LAZR01003494
370202
Bacteroidota
CCT
Arg
>WENV170672263
LAZR01000041
144149
Bacteroidota
TGG
Pro
>WENV170672163
LAZR01000011
372822
Bacteroidota
GCC
Gly
>WENV170672382
LAZR01000093
161858
Bacteroidota
GGG
Pro
>WENV170672536
LAZR01000257
373542
Bacteroidota
GGT
Thr
>WENV170672173
LAZR01000017
210921
Bacteroidota
GGC
Ala
>WENV170672172
LAZR01000017
158528
Bacteroidota
>WENV170672676
LAZR01000794
259964
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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