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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043055
LQAH01000736
370288
Bacillota
TTC
Glu
>WENV180043159
LQAH01004718
370288
Bacillota
TTC
Glu
>WENV180043192
LQAH01009398
370288
Bacillota
TTC
Glu
>WENV180043241
LQAH01014131
370288
Bacillota
TTC
Glu
>WENV180043377
LQAH01038377
370288
Bacillota
TTC
Glu
>WENV180043253
LQAH01015955
458950
Bacillota
GCA
Cys
>WENV180043322
LQAH01028726
279984
Bacillota
TAC
Val
>WENV180043340
LQAH01032044
279984
Bacillota
TAC
Val
>WENV180043363
LQAH01037266
279984
Bacillota
TAC
Val
>WENV180043260
LQAH01017218
172755
Bacillota
>WENV180043197
LQAH01009948
184565
Bacillota
GAT
Ile
>WENV180043357
LQAH01035762
184565
Bacillota
GAT
Ile
>WENV180043320
LQAH01028726
188302
Bacillota
GTC
Asp
>WENV180043347
LQAH01033379
188302
Bacillota
GTC
Asp
>WENV180043369
LQAH01037776
188302
Bacillota
GTC
Asp
>WENV180043296
LQAH01025004
261598
Bacillota
TGT
Thr
>WENV180043346
LQAH01033379
261598
Bacillota
TGT
Thr
>WENV180043044
LQAH01000606
171593
Bacillota
TGG
Pro
>WENV180043262
LQAH01017218
171593
Bacillota
TGG
Pro
>WENV180043083
LQAH01001633
371396
Bacillota
GCC
Gly
>WENV180043345
LQAH01033243
371396
Bacillota
GCC
Gly
>WENV180043074
LQAH01001153
234425
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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