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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170797072
MDSV01174509
295152
Actinomycetota
GTT
Asn
>WENV170794035
MDSV01125644
240825
Actinomycetota
GTG
His
>WENV170794007
MDSV01125368
413688
Actinomycetota
CCC
Gly
>WENV170796652
MDSV01167388
413688
Actinomycetota
CCC
Gly
>WENV170789135
MDSV01045385
73605
Actinomycetota
CAG
Leu
>WENV170796041
MDSV01158095
45926
Actinomycetota
TGA
Ser
>WENV170790048
MDSV01060074
240960
Actinomycetota
TTC
Glu
>WENV170801216
MDSV01243218
259567
Actinomycetota
CTT
Lys
>WENV170797073
MDSV01174509
148837
Actinomycetota
CAT
Met
>WENV170792053
MDSV01093216
16376
Actinomycetota
CGA
Ser
>WENV170790638
MDSV01069462
240687
Actinomycetota
>WENV170790761
MDSV01071518
237513
Actinomycetota
ACG
Arg
>WENV170797870
MDSV01187724
105186
Actinomycetota
TAG
Leu
>WENV170790275
MDSV01063497
310739
Actinomycetota
TTT
Lys
>WENV170796042
MDSV01158095
11546
Actinomycetota
GCT
Ser
>WENV170795638
MDSV01152086
322106
Actinomycetota
GCC
Gly
>WENV170786458
MDSV01003591
179547
Actinomycetota
GGG
Pro
>WENV170799811
MDSV01219779
401680
Actinomycetota
CTG
Gln
>WENV170786941
MDSV01010843
237445
Actinomycetota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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