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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170802252
MDSW01010247
448974
Gammaproteobacteria
GCA
Cys
>WENV170808012
MDSW01107911
277410
Gammaproteobacteria
TTT
Lys
>WENV170810790
MDSW01155136
174334
Gammaproteobacteria
>WENV170812983
MDSW01192369
174334
Gammaproteobacteria
>WENV170811886
MDSW01174268
67514
Gammaproteobacteria
TAA
Leu
>WENV170811429
MDSW01166647
195797
Gammaproteobacteria
ACG
Arg
>WENV170809772
MDSW01137930
18367
Gammaproteobacteria
GCT
Ser
>WENV170809238
MDSW01128503
309075
Gammaproteobacteria
GTT
Asn
>WENV170804134
MDSW01041983
198668
Gammaproteobacteria
>WENV170808096
MDSW01109049
198668
Gammaproteobacteria
>WENV170802723
MDSW01018528
261853
Gammaproteobacteria
GTT
Asn
>WENV170804087
MDSW01041138
261853
Gammaproteobacteria
GTT
Asn
>WENV170805149
MDSW01060054
261853
Gammaproteobacteria
GTT
Asn
>WENV170805767
MDSW01070380
261853
Gammaproteobacteria
GTT
Asn
>WENV170803093
MDSW01024619
108980
Gammaproteobacteria
TAG
Leu
>WENV170806717
MDSW01086052
108980
Gammaproteobacteria
TAG
Leu
>WENV170802020
MDSW01006166
263230
Gammaproteobacteria
TTT
Lys
>WENV170803385
MDSW01029342
263230
Gammaproteobacteria
TTT
Lys
>WENV170810861
MDSW01156305
263230
Gammaproteobacteria
TTT
Lys
>WENV170812866
MDSW01190443
161665
Gammaproteobacteria
CCG
Arg
>WENV170812539
MDSW01185334
319314
Gammaproteobacteria
TGT
Thr
>WENV170814167
MDSW01212320
210855
Gammaproteobacteria
ACG
Arg
>WENV170812914
MDSW01191276
305458
Gammaproteobacteria
TAC
Val
>WENV170805025
MDSW01057547
230238
Gammaproteobacteria
TGG
Pro
>WENV170805427
MDSW01064782
230238
Gammaproteobacteria
TGG
Pro
>WENV170808710
MDSW01119780
231877
Gammaproteobacteria
GAT
Ile
>WENV170807561
MDSW01100502
282403
Gammaproteobacteria
TTT
Lys
>WENV170807853
MDSW01105457
71882
Gammaproteobacteria
TAA
Leu
>WENV170805923
MDSW01073144
65736
Gammaproteobacteria
TAA
Leu
>WENV170806129
MDSW01077172
65736
Gammaproteobacteria
TAA
Leu
>WENV170806943
MDSW01090034
65736
Gammaproteobacteria
TAA
Leu
>WENV170809801
MDSW01138442
65736
Gammaproteobacteria
TAA
Leu
>WENV170810314
MDSW01146904
65736
Gammaproteobacteria
TAA
Leu
>WENV170812029
MDSW01176448
65736
Gammaproteobacteria
TAA
Leu
>WENV170812652
MDSW01187105
65736
Gammaproteobacteria
TAA
Leu
>WENV170813071
MDSW01193668
65736
Gammaproteobacteria
TAA
Leu
>WENV170803975
MDSW01039265
21308
Gammaproteobacteria
GGA
Ser
>WENV170807127
MDSW01093311
260947
Gammaproteobacteria
TTG
Gln
>WENV170811362
MDSW01165338
15488
Gammaproteobacteria
GCT
Ser
>WENV170802172
MDSW01008994
229608
Gammaproteobacteria
CAT
Met
>WENV170802827
MDSW01020137
18690
Gammaproteobacteria
GGA
Ser
>WENV170807046
MDSW01091763
451853
Gammaproteobacteria
GCA
Cys
>WENV170807924
MDSW01106433
451853
Gammaproteobacteria
GCA
Cys
>WENV170812364
MDSW01182211
451853
Gammaproteobacteria
GCA
Cys
>WENV170814382
MDSW01215990
451853
Gammaproteobacteria
GCA
Cys
>WENV170809596
MDSW01135128
166420
Gammaproteobacteria
>WENV170805136
MDSW01059743
325641
Gammaproteobacteria
CCA
Trp
>WENV170809172
MDSW01127526
325641
Gammaproteobacteria
CCA
Trp
>WENV170809581
MDSW01134637
325641
Gammaproteobacteria
CCA
Trp
>WENV170802674
MDSW01017620
257697
Gammaproteobacteria
GTG
His
>WENV170808172
MDSW01110339
257697
Gammaproteobacteria
GTG
His
>WENV170812940
MDSW01191610
164285
Gammaproteobacteria
TCG
Arg
>WENV170801921
MDSW01004549
277638
Gammaproteobacteria
GCC
Gly
>WENV170804024
MDSW01040184
323307
Gammaproteobacteria
GGT
Thr
>WENV170812798
MDSW01189641
323307
Gammaproteobacteria
GGT
Thr
>WENV170810228
MDSW01145263
161327
Gammaproteobacteria
ACG
Arg
>WENV170811584
MDSW01169329
257590
Gammaproteobacteria
GGT
Thr
>WENV170813151
MDSW01194808
257590
Gammaproteobacteria
GGT
Thr
>WENV170807732
MDSW01103443
307111
Gammaproteobacteria
TAC
Val
>WENV170802337
MDSW01011727
189269
Gammaproteobacteria
CGG
Pro
>WENV170811790
MDSW01172871
262529
Gammaproteobacteria
TAC
Val
>WENV170804001
MDSW01039893
195820
Gammaproteobacteria
GTG
His
>WENV170814251
MDSW01213612
195820
Gammaproteobacteria
GTG
His
>WENV170813521
MDSW01201497
282654
Gammaproteobacteria
GGC
Ala
>WENV170811578
MDSW01169217
161939
Gammaproteobacteria
GAC
Val
>WENV170806087
MDSW01076176
121854
Gammaproteobacteria
TAG
Leu
>WENV170807422
MDSW01098315
159511
Gammaproteobacteria
CCT
Arg
>WENV170803559
MDSW01031567
471753
Gammaproteobacteria
GCA
Cys
>WENV170804359
MDSW01045989
471753
Gammaproteobacteria
GCA
Cys
>WENV170805922
MDSW01073144
471753
Gammaproteobacteria
GCA
Cys
>WENV170806128
MDSW01077172
471753
Gammaproteobacteria
GCA
Cys
>WENV170806559
MDSW01083693
471753
Gammaproteobacteria
GCA
Cys
>WENV170807015
MDSW01091237
471753
Gammaproteobacteria
GCA
Cys
>WENV170807664
MDSW01102458
471753
Gammaproteobacteria
GCA
Cys
>WENV170809941
MDSW01140675
471753
Gammaproteobacteria
GCA
Cys
>WENV170812028
MDSW01176448
471753
Gammaproteobacteria
GCA
Cys
>WENV170812651
MDSW01187105
471753
Gammaproteobacteria
GCA
Cys
>WENV170812667
MDSW01187287
471753
Gammaproteobacteria
GCA
Cys
>WENV170813070
MDSW01193668
471753
Gammaproteobacteria
GCA
Cys
>WENV170814137
MDSW01211914
471753
Gammaproteobacteria
GCA
Cys
>WENV170814691
MDSW01221404
471753
Gammaproteobacteria
GCA
Cys
>WENV170814724
MDSW01222094
471753
Gammaproteobacteria
GCA
Cys
>WENV170804179
MDSW01042872
275207
Gammaproteobacteria
GGT
Thr
>WENV170809579
MDSW01134637
105812
Gammaproteobacteria
GTA
Tyr
>WENV170811595
MDSW01169516
105812
Gammaproteobacteria
GTA
Tyr
>WENV170803537
MDSW01031234
462237
Gammaproteobacteria
GCA
Cys
>WENV170807186
MDSW01094370
167177
Gammaproteobacteria
>WENV170805163
MDSW01060156
479393
Gammaproteobacteria
GCA
Cys
>WENV170807458
MDSW01098995
479393
Gammaproteobacteria
GCA
Cys
>WENV170809291
MDSW01129394
259519
Gammaproteobacteria
GGC
Ala
>WENV170802795
MDSW01019719
265381
Gammaproteobacteria
GTT
Asn
>WENV170803996
MDSW01039787
265381
Gammaproteobacteria
GTT
Asn
>WENV170807796
MDSW01104517
265381
Gammaproteobacteria
GTT
Asn
>WENV170814527
MDSW01218776
265381
Gammaproteobacteria
GTT
Asn
>WENV170806872
MDSW01088546
236600
Gammaproteobacteria
GTC
Asp
>WENV170810122
MDSW01143620
236600
Gammaproteobacteria
GTC
Asp
>WENV170811791
MDSW01172871
236600
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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