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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180044563
MOXS02008932
165001
Bacteroidota
GTT
Asn
>WENV180044611
MOXS02015119
165001
Bacteroidota
GTT
Asn
>WENV180045426
MOXS02122164
126974
Bacteroidota
TAC
Val
>WENV180044769
MOXS02037001
60611
Bacteroidota
GCT
Ser
>WENV180044987
MOXS02067713
127414
Bacteroidota
TGG
Pro
>WENV180045528
MOXS02138539
343033
Bacteroidota
TTC
Glu
>WENV180045309
MOXS02102677
95727
Bacteroidota
TAG
Leu
>WENV180044663
MOXS02022496
17496
Bacteroidota
GGA
Ser
>WENV180045151
MOXS02084446
47173
Bacteroidota
TGA
Ser
>WENV180045632
MOXS02154163
240684
Bacteroidota
TTT
Lys
>WENV180045225
MOXS02093495
240901
Bacteroidota
TTT
Lys
>WENV180044579
MOXS02010461
240901
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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