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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180053577
MPLV02026541
128889
Nitrososphaerota
GAT
Ile
>WENV180055114
MPLV02137101
128889
Nitrososphaerota
GAT
Ile
>WENV180055863
MPLV02187454
128889
Nitrososphaerota
GAT
Ile
>WENV180054347
MPLV02084599
351522
Nitrososphaerota
>WENV180054891
MPLV02119855
351522
Nitrososphaerota
>WENV180053608
MPLV02029353
145604
Nitrososphaerota
TCC
Gly
>WENV180053616
MPLV02029923
145604
Nitrososphaerota
TCC
Gly
>WENV180054859
MPLV02117915
145604
Nitrososphaerota
TCC
Gly
>WENV180055480
MPLV02162772
145604
Nitrososphaerota
TCC
Gly
>WENV180055578
MPLV02169194
145604
Nitrososphaerota
TCC
Gly
>WENV180055791
MPLV02182484
145604
Nitrososphaerota
TCC
Gly
>WENV180053609
MPLV02029353
61752
Nitrososphaerota
TGA
Ser
>WENV180054235
MPLV02076541
61752
Nitrososphaerota
TGA
Ser
>WENV180053610
MPLV02029353
145599
Nitrososphaerota
GGC
Ala
>WENV180053290
MPLV02007364
151807
Nitrososphaerota
GCC
Gly
>WENV180054507
MPLV02093457
151807
Nitrososphaerota
GCC
Gly
>WENV180054481
MPLV02092565
365061
Nitrososphaerota
GTG
His
>WENV180053832
MPLV02047042
365061
Nitrososphaerota
GTG
His
>WENV180053427
MPLV02015361
145602
Nitrososphaerota
CCC
Gly
>WENV180055625
MPLV02172357
133273
Nitrososphaerota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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