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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180057563
MPLX02011738
66752
Alphaproteobacteria
CAG
Leu
>WENV180060915
MPLX02195763
185438
Alphaproteobacteria
GAT
Ile
>WENV180063796
MPLX02376072
185438
Alphaproteobacteria
GAT
Ile
>WENV180062040
MPLX02261363
200119
Alphaproteobacteria
CAT
Met
>WENV180062805
MPLX02311047
200119
Alphaproteobacteria
CAT
Met
>WENV180060159
MPLX02153762
351511
Alphaproteobacteria
TTG
Gln
>WENV180057536
MPLX02010250
192195
Alphaproteobacteria
GTC
Asp
>WENV180057808
MPLX02023418
192195
Alphaproteobacteria
GTC
Asp
>WENV180060579
MPLX02177185
192195
Alphaproteobacteria
GTC
Asp
>WENV180061222
MPLX02212423
192195
Alphaproteobacteria
GTC
Asp
>WENV180063017
MPLX02325202
164825
Alphaproteobacteria
GAT
Ile
>WENV180061513
MPLX02230073
260015
Alphaproteobacteria
CTC
Glu
>WENV180061274
MPLX02215486
260015
Alphaproteobacteria
CTC
Glu
>WENV180059724
MPLX02128922
260015
Alphaproteobacteria
CTC
Glu
>WENV180057535
MPLX02010250
289664
Alphaproteobacteria
TAC
Val
>WENV180064208
MPLX02401698
193837
Alphaproteobacteria
CAT
Met
>WENV180063815
MPLX02377127
193837
Alphaproteobacteria
CAT
Met
>WENV180061133
MPLX02208771
193837
Alphaproteobacteria
CAT
Met
>WENV180059649
MPLX02124333
193837
Alphaproteobacteria
CAT
Met
>WENV180058854
MPLX02077550
193837
Alphaproteobacteria
CAT
Met
>WENV180058236
MPLX02043403
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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