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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180058532
MPLX02060294
128889
Nitrososphaerota
GAT
Ile
>WENV180061762
MPLX02243404
128889
Nitrososphaerota
GAT
Ile
>WENV180060361
MPLX02165058
351522
Nitrososphaerota
>WENV180060215
MPLX02157388
145604
Nitrososphaerota
TCC
Gly
>WENV180063519
MPLX02358451
145604
Nitrososphaerota
TCC
Gly
>WENV180063752
MPLX02373798
145604
Nitrososphaerota
TCC
Gly
>WENV180063753
MPLX02373798
61752
Nitrososphaerota
TGA
Ser
>WENV180057992
MPLX02030921
185587
Nitrososphaerota
CAT
Met
>WENV180063755
MPLX02373798
185587
Nitrososphaerota
CAT
Met
>WENV180063754
MPLX02373798
145599
Nitrososphaerota
GGC
Ala
>WENV180060231
MPLX02158075
151807
Nitrososphaerota
GCC
Gly
>WENV180059818
MPLX02134164
151807
Nitrososphaerota
GCC
Gly
>WENV180063756
MPLX02373798
365061
Nitrososphaerota
GTG
His
>WENV180062564
MPLX02295326
365061
Nitrososphaerota
GTG
His
>WENV180059379
MPLX02109143
145602
Nitrososphaerota
CCC
Gly
>WENV180059375
MPLX02109143
133273
Nitrososphaerota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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