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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180075688
MPMA02226693
89483
Alphaproteobacteria
GTA
Tyr
>WENV180075954
MPMA02247022
89483
Alphaproteobacteria
GTA
Tyr
>WENV180075966
MPMA02247702
89483
Alphaproteobacteria
GTA
Tyr
>WENV180076119
MPMA02259644
89483
Alphaproteobacteria
GTA
Tyr
>WENV180075143
MPMA02190799
306720
Alphaproteobacteria
CTT
Lys
>WENV180074381
MPMA02140038
377086
Alphaproteobacteria
GGT
Thr
>WENV180075113
MPMA02188902
259563
Alphaproteobacteria
GGC
Ala
>WENV180072631
MPMA02031313
370023
Alphaproteobacteria
CCC
Gly
>WENV180073834
MPMA02103872
66580
Alphaproteobacteria
CAG
Leu
>WENV180072954
MPMA02051994
203353
Alphaproteobacteria
CAT
Met
>WENV180075802
MPMA02235835
21235
Alphaproteobacteria
GGA
Ser
>WENV180072616
MPMA02030802
167092
Alphaproteobacteria
GAT
Ile
>WENV180074002
MPMA02114124
167092
Alphaproteobacteria
GAT
Ile
>WENV180074004
MPMA02114149
167092
Alphaproteobacteria
GAT
Ile
>WENV180075685
MPMA02226601
309182
Alphaproteobacteria
TAC
Val
>WENV180075137
MPMA02190602
307687
Alphaproteobacteria
GGC
Ala
>WENV180073977
MPMA02112237
169921
Alphaproteobacteria
CCT
Arg
>WENV180072186
MPMA02006060
302408
Alphaproteobacteria
GAA
Phe
>WENV180072189
MPMA02006144
302408
Alphaproteobacteria
GAA
Phe
>WENV180073792
MPMA02100783
302408
Alphaproteobacteria
GAA
Phe
>WENV180072330
MPMA02013687
452093
Alphaproteobacteria
GCA
Cys
>WENV180072924
MPMA02050257
452093
Alphaproteobacteria
GCA
Cys
>WENV180073295
MPMA02071945
452093
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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