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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180074285
MPMA02133914
105077
Gammaproteobacteria
>WENV180072570
MPMA02028008
108980
Gammaproteobacteria
TAG
Leu
>WENV180076402
MPMA02278383
108980
Gammaproteobacteria
TAG
Leu
>WENV180075868
MPMA02240622
18775
Gammaproteobacteria
GCT
Ser
>WENV180074925
MPMA02177061
21308
Gammaproteobacteria
GGA
Ser
>WENV180074965
MPMA02179719
21308
Gammaproteobacteria
GGA
Ser
>WENV180076183
MPMA02263331
21308
Gammaproteobacteria
GGA
Ser
>WENV180076135
MPMA02260081
301690
Gammaproteobacteria
GGC
Ala
>WENV180074999
MPMA02181453
9771
Gammaproteobacteria
GCT
Ser
>WENV180072177
MPMA02005357
258493
Gammaproteobacteria
GGC
Ala
>WENV180074343
MPMA02137880
112932
Gammaproteobacteria
GAG
Leu
>WENV180075218
MPMA02195965
112932
Gammaproteobacteria
GAG
Leu
>WENV180075383
MPMA02205858
112932
Gammaproteobacteria
GAG
Leu
>WENV180075049
MPMA02184712
193317
Gammaproteobacteria
TGG
Pro
>WENV180073821
MPMA02102796
21792
Gammaproteobacteria
GGA
Ser
>WENV180073038
MPMA02056823
159335
Gammaproteobacteria
CAT
Met
>WENV180075640
MPMA02223357
159335
Gammaproteobacteria
CAT
Met
>WENV180075656
MPMA02224415
159335
Gammaproteobacteria
CAT
Met
>WENV180074420
MPMA02141995
263347
Gammaproteobacteria
TTT
Lys
>WENV180075270
MPMA02198811
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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