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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002444
NHNJ01043556
275643
Alphaproteobacteria
TTT
Lys
>WENV171002445
NHNJ01043568
129948
Alphaproteobacteria
>WENV171002525
NHNJ01080650
129948
Alphaproteobacteria
>WENV171002515
NHNJ01073085
27419
Alphaproteobacteria
GGA
Ser
>WENV171002617
NHNJ01101502
259585
Alphaproteobacteria
CCA
Trp
>WENV171002425
NHNJ01041767
259585
Alphaproteobacteria
CCA
Trp
>WENV171002363
NHNJ01007134
159552
Alphaproteobacteria
TGG
Pro
>WENV171002570
NHNJ01087619
89072
Alphaproteobacteria
GAG
Leu
>WENV171002647
NHNJ01116033
26668
Alphaproteobacteria
GCT
Ser
>WENV171002359
NHNJ01005840
26668
Alphaproteobacteria
GCT
Ser
>WENV171002501
NHNJ01063756
26668
Alphaproteobacteria
GCT
Ser
>WENV171002510
NHNJ01069604
88884
Alphaproteobacteria
CAG
Leu
>WENV171002455
NHNJ01044753
406362
Alphaproteobacteria
GAA
Phe
>WENV171002666
NHNJ01130281
114680
Alphaproteobacteria
TAG
Leu
>WENV171002433
NHNJ01042606
114680
Alphaproteobacteria
TAG
Leu
>WENV171002381
NHNJ01014798
406246
Alphaproteobacteria
GCC
Gly
>WENV171002448
NHNJ01043653
76380
Alphaproteobacteria
GAG
Leu
>WENV171002358
NHNJ01005743
377113
Alphaproteobacteria
GAC
Val
>WENV171002664
NHNJ01127914
209273
Alphaproteobacteria
GTG
His
>WENV171002366
NHNJ01008966
129121
Alphaproteobacteria
CAA
Leu
>WENV171002472
NHNJ01049232
231929
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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