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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002711
NHNJ01137952
117444
Bacteroidota
GTA
Tyr
>WENV171002612
NHNJ01100439
69105
Bacteroidota
GCT
Ser
>WENV171002654
NHNJ01118198
109317
Bacteroidota
CAA
Leu
>WENV171002720
NHNJ01139662
109317
Bacteroidota
CAA
Leu
>WENV171002804
NHNJ01174164
49934
Bacteroidota
TGA
Ser
>WENV171002842
NHNJ01181353
369213
Bacteroidota
GCC
Gly
>WENV171002888
NHNJ01199738
314601
Bacteroidota
>WENV171002877
NHNJ01195846
139505
Bacteroidota
TAC
Val
>WENV171002703
NHNJ01136921
258742
Bacteroidota
TTT
Lys
>WENV171002536
NHNJ01082384
57357
Bacteroidota
TGA
Ser
>WENV171002663
NHNJ01127452
160349
Bacteroidota
GTG
His
>WENV171002353
NHNJ01004739
166467
Bacteroidota
>WENV171002710
NHNJ01137577
95721
Bacteroidota
GTA
Tyr
>WENV171002680
NHNJ01133280
258133
Bacteroidota
>WENV171002843
NHNJ01181353
42104
Bacteroidota
TAA
Leu
>WENV171002581
NHNJ01090490
448855
Bacteroidota
GCA
Cys
>WENV171002652
NHNJ01117857
448855
Bacteroidota
GCA
Cys
>WENV171002399
NHNJ01025260
177164
Bacteroidota
GTC
Asp
>WENV171002625
NHNJ01108043
223232
Bacteroidota
>WENV171002688
NHNJ01135430
149778
Bacteroidota
TAC
Val
>WENV171002613
NHNJ01100439
144149
Bacteroidota
TGG
Pro
>WENV171002614
NHNJ01100439
144149
Bacteroidota
TGG
Pro
>WENV171002440
NHNJ01043338
321470
Bacteroidota
GAA
Phe
>WENV171002569
NHNJ01087571
321470
Bacteroidota
GAA
Phe
>WENV171002682
NHNJ01133555
369841
Bacteroidota
>WENV171002690
NHNJ01135939
24600
Bacteroidota
GGA
Ser
>WENV171002615
NHNJ01100685
310118
Bacteroidota
CCA
Trp
>WENV171002606
NHNJ01094478
106218
Bacteroidota
CAA
Leu
>WENV171002845
NHNJ01182342
325477
Bacteroidota
TTG
Gln
>WENV171002778
NHNJ01160784
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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