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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002373
NHNJ01011669
165001
Bacteroidota
GTT
Asn
>WENV171002680
NHNJ01133280
238765
Bacteroidota
GCC
Gly
>WENV171002703
NHNJ01136921
294483
Bacteroidota
TTT
Lys
>WENV171002685
NHNJ01134522
99288
Bacteroidota
TAG
Leu
>WENV171002612
NHNJ01100439
59355
Bacteroidota
GCT
Ser
>WENV171002778
NHNJ01160784
127458
Bacteroidota
GAC
Val
>WENV171002672
NHNJ01131345
45519
Bacteroidota
GGA
Ser
>WENV171002575
NHNJ01088392
235936
Bacteroidota
TTT
Lys
>WENV171002614
NHNJ01100439
127414
Bacteroidota
TGG
Pro
>WENV171002613
NHNJ01100439
127414
Bacteroidota
TGG
Pro
>WENV171002845
NHNJ01182342
274593
Bacteroidota
TTG
Gln
>WENV171002536
NHNJ01082384
44938
Bacteroidota
TGA
Ser
>WENV171002804
NHNJ01174164
44938
Bacteroidota
TGA
Ser
>WENV171002690
NHNJ01135939
17987
Bacteroidota
GGA
Ser
>WENV171002391
NHNJ01023100
235935
Bacteroidota
TCC
Gly
>WENV171002888
NHNJ01199738
235802
Bacteroidota
CAT
Met
>WENV171002682
NHNJ01133555
341187
Bacteroidota
TTG
Gln
>WENV171002353
NHNJ01004739
145512
Bacteroidota
CAT
Met
>WENV171002720
NHNJ01139662
97383
Bacteroidota
CAA
Leu
>WENV171002710
NHNJ01137577
80676
Bacteroidota
GTA
Tyr
>WENV171002569
NHNJ01087571
246641
Bacteroidota
GAA
Phe
>WENV171002440
NHNJ01043338
246641
Bacteroidota
GAA
Phe
>WENV171002697
NHNJ01136494
145408
Bacteroidota
TCT
Arg
>WENV171002688
NHNJ01135430
136274
Bacteroidota
TAC
Val
>WENV171002611
NHNJ01100164
145555
Bacteroidota
GTC
Asp
>WENV171002568
NHNJ01087158
240901
Bacteroidota
TTT
Lys
>WENV171002677
NHNJ01132204
240901
Bacteroidota
TTT
Lys
>WENV171002399
NHNJ01025260
185921
Bacteroidota
GTC
Asp
>WENV171002498
NHNJ01062236
347866
Bacteroidota
TTC
Glu
>WENV171002642
NHNJ01113869
347866
Bacteroidota
TTC
Glu
>WENV171002877
NHNJ01195846
127449
Bacteroidota
TAC
Val
>WENV171002654
NHNJ01118198
103368
Bacteroidota
CAA
Leu
>WENV171002791
NHNJ01169663
193473
Bacteroidota
GTC
Asp
>WENV171002711
NHNJ01137952
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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