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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117060
OARC01008632
271108
Spirochaetota
GCC
Gly
>WENV180117051
OARC01007211
171635
Spirochaetota
GTG
His
>WENV180117075
OARC01012770
50223
Spirochaetota
TAA
Leu
>WENV180117107
OARC01026446
171637
Spirochaetota
>WENV180117089
OARC01017210
171632
Spirochaetota
CAT
Met
>WENV180117104
OARC01025158
278747
Spirochaetota
CGT
Thr
>WENV180117050
OARC01007211
171634
Spirochaetota
TCT
Arg
>WENV180117045
OARC01006432
271110
Spirochaetota
GTT
Asn
>WENV180117037
OARC01004441
90430
Spirochaetota
TGA
Ser
>WENV180117127
OARC01033178
377695
Spirochaetota
TCC
Gly
>WENV180117038
OARC01004441
271105
Spirochaetota
CCT
Arg
>WENV180117013
OARC01001589
107754
Spirochaetota
GAG
Leu
>WENV180117049
OARC01007211
171633
Spirochaetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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