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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180138402
OATQ01000046
369838
Bacteroidota
CCT
Arg
>WENV180138370
OATQ01000027
448691
Bacteroidota
TTG
Gln
>WENV180138495
OATQ01000232
448691
Bacteroidota
TTG
Gln
>WENV180138546
OATQ01000376
160436
Bacteroidota
GGC
Ala
>WENV180138410
OATQ01000067
369581
Bacteroidota
>WENV180138492
OATQ01000218
369581
Bacteroidota
>WENV180138323
OATQ01000010
258780
Bacteroidota
>WENV180138454
OATQ01000136
160416
Bacteroidota
GTG
His
>WENV180138455
OATQ01000136
160416
Bacteroidota
GTG
His
>WENV180138438
OATQ01000107
65110
Bacteroidota
CAG
Leu
>WENV180138441
OATQ01000113
65110
Bacteroidota
CAG
Leu
>WENV180138349
OATQ01000018
49944
Bacteroidota
TAA
Leu
>WENV180138391
OATQ01000040
54117
Bacteroidota
TGA
Ser
>WENV180138502
OATQ01000259
182139
Bacteroidota
CGG
Pro
>WENV180138276
OATQ01000001
144955
Bacteroidota
GGG
Pro
>WENV180138450
OATQ01000128
144955
Bacteroidota
GGG
Pro
>WENV180138407
OATQ01000057
259292
Bacteroidota
CGT
Thr
>WENV180138377
OATQ01000032
65111
Bacteroidota
CAA
Leu
>WENV180138493
OATQ01000227
26362
Bacteroidota
GCT
Ser
>WENV180138478
OATQ01000202
138923
Bacteroidota
TAC
Val
>WENV180138479
OATQ01000202
138923
Bacteroidota
TAC
Val
>WENV180138757
OATQ01008896
138923
Bacteroidota
TAC
Val
>WENV180138384
OATQ01000037
261339
Bacteroidota
CCA
Trp
>WENV180138765
OATQ01014824
261419
Bacteroidota
CGG
Pro
>WENV180138776
OATQ01019497
65641
Bacteroidota
GAG
Leu
>WENV180138383
OATQ01000037
261338
Bacteroidota
GTT
Asn
>WENV180138434
OATQ01000094
374505
Bacteroidota
CTC
Glu
>WENV180138507
OATQ01000266
124700
Bacteroidota
>WENV180138510
OATQ01000266
124700
Bacteroidota
>WENV180138371
OATQ01000028
370133
Bacteroidota
CCG
Arg
>WENV180138443
OATQ01000116
105470
Bacteroidota
TAG
Leu
>WENV180138393
OATQ01000041
52815
Bacteroidota
TAA
Leu
>WENV180138369
OATQ01000026
259289
Bacteroidota
CTC
Glu
>WENV180138544
OATQ01000367
261333
Bacteroidota
CCC
Gly
>WENV180138508
OATQ01000266
65114
Bacteroidota
GAG
Leu
>WENV180138442
OATQ01000113
71334
Bacteroidota
GAG
Leu
>WENV180138388
OATQ01000040
259271
Bacteroidota
CTT
Lys
>WENV180138746
OATQ01006819
259223
Bacteroidota
>WENV180138476
OATQ01000195
159953
Bacteroidota
CAT
Met
>WENV180138646
OATQ01001111
20980
Bacteroidota
GGA
Ser
>WENV180138403
OATQ01000047
448605
Bacteroidota
CTG
Gln
>WENV180138439
OATQ01000107
259272
Bacteroidota
CGT
Thr
>WENV180138474
OATQ01000191
141365
Bacteroidota
GGG
Pro
>WENV180138385
OATQ01000037
449089
Bacteroidota
TTG
Gln
>WENV180138390
OATQ01000040
49945
Bacteroidota
TGA
Ser
>WENV180138494
OATQ01000230
159415
Bacteroidota
>WENV180138444
OATQ01000117
160434
Bacteroidota
GTG
His
>WENV180138437
OATQ01000107
160417
Bacteroidota
GGC
Ala
>WENV180138389
OATQ01000040
288732
Bacteroidota
CTT
Lys
>WENV180138497
OATQ01000243
448600
Bacteroidota
CTG
Gln
>WENV180138498
OATQ01000243
448600
Bacteroidota
CTG
Gln
>WENV180138463
OATQ01000152
143497
Bacteroidota
TGG
Pro
>WENV180138789
OATQ01035237
449090
Bacteroidota
CTG
Gln
>WENV180138348
OATQ01000018
285851
Bacteroidota
GCC
Gly
>WENV180138350
OATQ01000018
285851
Bacteroidota
GCC
Gly
>WENV180138440
OATQ01000113
285851
Bacteroidota
GCC
Gly
>WENV180138582
OATQ01000552
261335
Bacteroidota
TTT
Lys
>WENV180138432
OATQ01000093
54039
Bacteroidota
TGA
Ser
>WENV180138447
OATQ01000120
54039
Bacteroidota
TGA
Ser
>WENV180138459
OATQ01000146
54039
Bacteroidota
TGA
Ser
>WENV180138490
OATQ01000215
54039
Bacteroidota
TGA
Ser
>WENV180138533
OATQ01000338
54039
Bacteroidota
TGA
Ser
>WENV180138542
OATQ01000360
54039
Bacteroidota
TGA
Ser
>WENV180138705
OATQ01002806
54039
Bacteroidota
TGA
Ser
>WENV180138382
OATQ01000037
261337
Bacteroidota
>WENV180138527
OATQ01000318
160458
Bacteroidota
>WENV180138378
OATQ01000034
193541
Bacteroidota
GTT
Asn
>WENV180138379
OATQ01000034
193541
Bacteroidota
GTT
Asn
>WENV180138417
OATQ01000071
193541
Bacteroidota
GTT
Asn
>WENV180138418
OATQ01000071
193541
Bacteroidota
GTT
Asn
>WENV180138627
OATQ01000910
193541
Bacteroidota
GTT
Asn
>WENV180138794
OATQ01035440
193541
Bacteroidota
GTT
Asn
>WENV180138307
OATQ01000008
95591
Bacteroidota
GTA
Tyr
>WENV180138339
OATQ01000014
95591
Bacteroidota
GTA
Tyr
>WENV180138453
OATQ01000136
95591
Bacteroidota
GTA
Tyr
>WENV180138445
OATQ01000117
20913
Bacteroidota
GGA
Ser
>WENV180138491
OATQ01000218
142773
Bacteroidota
TGG
Pro
>WENV180138457
OATQ01000140
160459
Bacteroidota
GGC
Ala
>WENV180138475
OATQ01000193
160459
Bacteroidota
GGC
Ala
>WENV180138398
OATQ01000045
369579
Bacteroidota
GGT
Thr
>WENV180138372
OATQ01000029
160415
Bacteroidota
TCT
Arg
>WENV180138345
OATQ01000016
448601
Bacteroidota
TTG
Gln
>WENV180138684
OATQ01001983
162516
Bacteroidota
TGC
Ala
>WENV180138358
OATQ01000022
21025
Bacteroidota
GGA
Ser
>WENV180138552
OATQ01000413
21025
Bacteroidota
GGA
Ser
>WENV180138380
OATQ01000034
370351
Bacteroidota
CCT
Arg
>WENV180138446
OATQ01000119
18452
Bacteroidota
GGA
Ser
>WENV180138529
OATQ01000329
18452
Bacteroidota
GGA
Ser
>WENV180138409
OATQ01000067
30330
Bacteroidota
CGA
Ser
>WENV180138427
OATQ01000090
160435
Bacteroidota
GGC
Ala
>WENV180138614
OATQ01000795
371314
Bacteroidota
GCA
Cys
>WENV180138566
OATQ01000484
105282
Bacteroidota
TAG
Leu
>WENV180138577
OATQ01000525
278748
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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