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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180228526
OBCD01000054
238370
Gammaproteobacteria
TTT
Lys
>WENV180228697
OBCD01013487
44864
Gammaproteobacteria
TGA
Ser
>WENV180228645
OBCD01002212
235516
Gammaproteobacteria
GTG
His
>WENV180228647
OBCD01002212
235516
Gammaproteobacteria
GTG
His
>WENV180228500
OBCD01000031
161963
Gammaproteobacteria
GAC
Val
>WENV180228537
OBCD01000075
342830
Gammaproteobacteria
>WENV180228538
OBCD01000075
342830
Gammaproteobacteria
>WENV180228683
OBCD01008570
26374
Gammaproteobacteria
GGA
Ser
>WENV180228590
OBCD01000402
176256
Gammaproteobacteria
GTC
Asp
>WENV180228589
OBCD01000402
176256
Gammaproteobacteria
GTC
Asp
>WENV180228486
OBCD01000018
176256
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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