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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
183 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180275842
OBHU01000454
261473
Bacillota
CTT
Lys
>WENV180276178
OBHU01005470
293862
Bacillota
CTT
Lys
>WENV180275715
OBHU01000124
65532
Bacillota
CAA
Leu
>WENV180275781
OBHU01000286
41450
Bacillota
TAA
Leu
>WENV180275972
OBHU01001140
41450
Bacillota
TAA
Leu
>WENV180276578
OBHU01041496
269439
Bacillota
GCC
Gly
>WENV180276453
OBHU01024346
261392
Bacillota
GAA
Phe
>WENV180276745
OBHU01113018
261392
Bacillota
GAA
Phe
>WENV180275984
OBHU01001251
294027
Bacillota
TTT
Lys
>WENV180276659
OBHU01062766
294027
Bacillota
TTT
Lys
>WENV180275805
OBHU01000358
371352
Bacillota
CTC
Glu
>WENV180276715
OBHU01087596
71766
Bacillota
CAG
Leu
>WENV180275802
OBHU01000358
261497
Bacillota
GGT
Thr
>WENV180276237
OBHU01007931
451520
Bacillota
GCA
Cys
>WENV180276449
OBHU01024100
261394
Bacillota
CCG
Arg
>WENV180276252
OBHU01008602
261391
Bacillota
GTT
Asn
>WENV180276354
OBHU01012935
162485
Bacillota
CAT
Met
>WENV180276061
OBHU01002209
371351
Bacillota
CCA
Trp
>WENV180276760
OBHU01118773
316805
Bacillota
TGC
Ala
>WENV180276497
OBHU01030487
151240
Bacillota
TGG
Pro
>WENV180276714
OBHU01086750
88717
Bacillota
GTA
Tyr
>WENV180275817
OBHU01000387
190535
Bacillota
GTG
His
>WENV180276541
OBHU01035674
190535
Bacillota
GTG
His
>WENV180275634
OBHU01000023
41239
Bacillota
TAA
Leu
>WENV180275909
OBHU01000822
369774
Bacillota
GGT
Thr
>WENV180276392
OBHU01017756
369774
Bacillota
GGT
Thr
>WENV180276386
OBHU01016631
269920
Bacillota
CGC
Ala
>WENV180276535
OBHU01035021
257970
Bacillota
GAA
Phe
>WENV180276565
OBHU01038857
257970
Bacillota
GAA
Phe
>WENV180276629
OBHU01052568
257970
Bacillota
GAA
Phe
>WENV180276125
OBHU01003838
159454
Bacillota
GGG
Pro
>WENV180276317
OBHU01011121
159454
Bacillota
GGG
Pro
>WENV180275803
OBHU01000358
449146
Bacillota
CTG
Gln
>WENV180276179
OBHU01005484
449146
Bacillota
CTG
Gln
>WENV180276197
OBHU01006062
257963
Bacillota
>WENV180276278
OBHU01009511
257963
Bacillota
>WENV180276553
OBHU01036885
261354
Bacillota
GGT
Thr
>WENV180275977
OBHU01001183
393129
Bacillota
CTC
Glu
>WENV180275978
OBHU01001183
393129
Bacillota
CTC
Glu
>WENV180275979
OBHU01001183
393129
Bacillota
CTC
Glu
>WENV180276408
OBHU01020294
378277
Bacillota
CTC
Glu
>WENV180275912
OBHU01000835
410090
Bacillota
GCC
Gly
>WENV180276135
OBHU01004116
89171
Bacillota
CAA
Leu
>WENV180276527
OBHU01034412
319387
Bacillota
CCA
Trp
>WENV180276164
OBHU01005058
270601
Bacillota
TTT
Lys
>WENV180276464
OBHU01025617
159242
Bacillota
CCG
Arg
>WENV180276343
OBHU01012036
450528
Bacillota
CCA
Trp
>WENV180276223
OBHU01007109
258854
Bacillota
TGC
Ala
>WENV180275693
OBHU01000098
127299
Bacillota
GTA
Tyr
>WENV180276468
OBHU01025732
257972
Bacillota
CGG
Pro
>WENV180276085
OBHU01002804
159318
Bacillota
CGG
Pro
>WENV180276402
OBHU01019818
159318
Bacillota
CGG
Pro
>WENV180276476
OBHU01026676
124618
Bacillota
GAG
Leu
>WENV180276000
OBHU01001445
259283
Bacillota
CGT
Thr
>WENV180276147
OBHU01004584
371232
Bacillota
CTC
Glu
>WENV180276323
OBHU01011277
7928
Bacillota
GGA
Ser
>WENV180276383
OBHU01016340
286917
Bacillota
TGC
Ala
>WENV180276262
OBHU01008972
448255
Bacillota
CTG
Gln
>WENV180276467
OBHU01025732
448255
Bacillota
CTG
Gln
>WENV180276366
OBHU01014023
159234
Bacillota
CAC
Val
>WENV180276671
OBHU01067070
159234
Bacillota
CAC
Val
>WENV180276243
OBHU01008150
49778
Bacillota
AAG
Leu
>WENV180276244
OBHU01008150
49778
Bacillota
AAG
Leu
>WENV180276470
OBHU01026198
49778
Bacillota
AAG
Leu
>WENV180276236
OBHU01007931
272758
Bacillota
GCC
Gly
>WENV180276395
OBHU01018427
272758
Bacillota
GCC
Gly
>WENV180276352
OBHU01012692
124820
Bacillota
TAG
Leu
>WENV180276196
OBHU01006038
162688
Bacillota
GAT
Ile
>WENV180276580
OBHU01042719
162487
Bacillota
CGG
Pro
>WENV180276635
OBHU01054385
159455
Bacillota
ACG
Arg
>WENV180276200
OBHU01006138
133221
Bacillota
CAA
Leu
>WENV180275748
OBHU01000191
18457
Bacillota
GCT
Ser
>WENV180275653
OBHU01000044
261495
Bacillota
CTT
Lys
>WENV180275766
OBHU01000221
322184
Bacillota
GTT
Asn
>WENV180275804
OBHU01000358
323823
Bacillota
TTT
Lys
>WENV180275818
OBHU01000387
323823
Bacillota
TTT
Lys
>WENV180276180
OBHU01005484
323823
Bacillota
TTT
Lys
>WENV180276543
OBHU01035674
323823
Bacillota
TTT
Lys
>WENV180276319
OBHU01011257
258643
Bacillota
TTT
Lys
>WENV180276455
OBHU01024421
261284
Bacillota
CTT
Lys
>WENV180275962
OBHU01001127
90297
Bacillota
CAA
Leu
>WENV180276748
OBHU01115894
261489
Bacillota
TGC
Ala
>WENV180276545
OBHU01036039
189541
Bacillota
GTC
Asp
>WENV180275825
OBHU01000411
20115
Bacillota
GCT
Ser
>WENV180276694
OBHU01075129
158271
Bacillota
CCT
Arg
>WENV180275905
OBHU01000786
259286
Bacillota
TTT
Lys
>WENV180276457
OBHU01024534
369393
Bacillota
TTC
Glu
>WENV180275789
OBHU01000304
20212
Bacillota
GCT
Ser
>WENV180276316
OBHU01011093
64857
Bacillota
TAA
Leu
>WENV180276550
OBHU01036605
224291
Bacillota
CCT
Arg
>WENV180276582
OBHU01043656
224291
Bacillota
CCT
Arg
>WENV180276473
OBHU01026381
56553
Bacillota
CAG
Leu
>WENV180276651
OBHU01058648
56553
Bacillota
CAG
Leu
>WENV180276621
OBHU01050112
369390
Bacillota
TGT
Thr
>WENV180275823
OBHU01000411
18394
Bacillota
TGA
Ser
>WENV180275824
OBHU01000411
18394
Bacillota
TGA
Ser
>WENV180276255
OBHU01008684
371071
Bacillota
GCC
Gly
>WENV180276462
OBHU01025491
139256
Bacillota
GGG
Pro
>WENV180276670
OBHU01066875
166292
Bacillota
GAT
Ile
>WENV180275945
OBHU01001046
259285
Bacillota
CTG
Gln
>WENV180276481
OBHU01027500
11993
Bacillota
GGA
Ser
>WENV180276188
OBHU01005912
208905
Bacillota
CGG
Pro
>WENV180276044
OBHU01002025
370126
Bacillota
CTC
Glu
>WENV180276303
OBHU01010406
370126
Bacillota
CTC
Glu
>WENV180276304
OBHU01010406
370126
Bacillota
CTC
Glu
>WENV180276305
OBHU01010406
370126
Bacillota
CTC
Glu
>WENV180276514
OBHU01033117
41297
Bacillota
TGA
Ser
>WENV180276273
OBHU01009273
369776
Bacillota
CTG
Gln
>WENV180275834
OBHU01000438
371251
Bacillota
>WENV180276542
OBHU01035674
371353
Bacillota
TTG
Gln
>WENV180275686
OBHU01000090
162600
Bacillota
CAT
Met
>WENV180276532
OBHU01034901
448210
Bacillota
CTG
Gln
>WENV180275843
OBHU01000454
371335
Bacillota
CTC
Glu
>WENV180275973
OBHU01001140
181591
Bacillota
ACG
Arg
>WENV180276658
OBHU01062519
159246
Bacillota
CGC
Ala
>WENV180275751
OBHU01000198
191001
Bacillota
TCT
Arg
>WENV180276425
OBHU01022211
49796
Bacillota
TGA
Ser
>WENV180276465
OBHU01025682
261393
Bacillota
CGT
Thr
>WENV180276488
OBHU01028899
450457
Bacillota
CTG
Gln
>WENV180275692
OBHU01000098
369508
Bacillota
>WENV180276722
OBHU01090576
288015
Bacillota
TAC
Val
>WENV180276426
OBHU01022211
5393
Bacillota
GCT
Ser
>WENV180276595
OBHU01045810
67413
Bacillota
CAG
Leu
>WENV180276074
OBHU01002538
58231
Bacillota
AAG
Leu
>WENV180276124
OBHU01003803
58231
Bacillota
AAG
Leu
>WENV180275885
OBHU01000678
313551
Bacillota
GGT
Thr
>WENV180276669
OBHU01066875
320672
Bacillota
TGC
Ala
>WENV180276463
OBHU01025614
448256
Bacillota
TTG
Gln
>WENV180276738
OBHU01105614
258604
Bacillota
TGC
Ala
>WENV180276151
OBHU01004745
22898
Bacillota
GCT
Ser
>WENV180276166
OBHU01005107
376229
Bacillota
CTC
Glu
>WENV180276583
OBHU01043890
261310
Bacillota
CGT
Thr
>WENV180276500
OBHU01030651
261475
Bacillota
GCC
Gly
>WENV180275746
OBHU01000191
259284
Bacillota
CTT
Lys
>WENV180276679
OBHU01070414
283213
Bacillota
CTT
Lys
>WENV180276040
OBHU01001985
449102
Bacillota
CCA
Trp
>WENV180275882
OBHU01000655
65112
Bacillota
AAG
Leu
>WENV180276430
OBHU01022495
257960
Bacillota
CGC
Ala
>WENV180276007
OBHU01001484
159862
Bacillota
>WENV180276091
OBHU01002897
448207
Bacillota
CCC
Gly
>WENV180276176
OBHU01005378
448207
Bacillota
CCC
Gly
>WENV180276628
OBHU01052303
117006
Bacillota
GTA
Tyr
>WENV180276552
OBHU01036827
159075
Bacillota
CGG
Pro
>WENV180276382
OBHU01016225
18326
Bacillota
CGA
Ser
>WENV180276675
OBHU01069074
64818
Bacillota
AAG
Leu
>WENV180275635
OBHU01000023
370101
Bacillota
GTT
Asn
>WENV180276308
OBHU01010646
20902
Bacillota
GCT
Ser
>WENV180276719
OBHU01090024
369271
Bacillota
GCC
Gly
>WENV180275918
OBHU01000878
124834
Bacillota
TAG
Leu
>WENV180275727
OBHU01000154
51157
Bacillota
>WENV180275685
OBHU01000090
293658
Bacillota
TAC
Val
>WENV180275971
OBHU01001140
293658
Bacillota
TAC
Val
>WENV180276626
OBHU01052303
293658
Bacillota
TAC
Val
>WENV180275995
OBHU01001348
312418
Bacillota
GAA
Phe
>WENV180276699
OBHU01076826
312418
Bacillota
GAA
Phe
>WENV180276693
OBHU01074645
13270
Bacillota
GGA
Ser
>WENV180276356
OBHU01013021
293349
Bacillota
GGT
Thr
>WENV180276138
OBHU01004154
166295
Bacillota
GTT
Asn
>WENV180276599
OBHU01047448
369280
Bacillota
GTT
Asn
>WENV180276617
OBHU01049571
162489
Bacillota
GTC
Asp
>WENV180275989
OBHU01001297
318231
Bacillota
CGT
Thr
>WENV180276401
OBHU01019752
93380
Bacillota
CAG
Leu
>WENV180275730
OBHU01000157
270248
Bacillota
CCA
Trp
>WENV180276591
OBHU01044874
448339
Bacillota
GCA
Cys
>WENV180276441
OBHU01023412
159236
Bacillota
GTT
Asn
>WENV180276655
OBHU01060905
159236
Bacillota
GTT
Asn
>WENV180276632
OBHU01053909
276063
Bacillota
CTC
Glu
>WENV180276593
OBHU01045277
375901
Bacillota
CCG
Arg
>WENV180276696
OBHU01076377
162486
Bacillota
GAT
Ile
>WENV180276313
OBHU01010866
159239
Bacillota
CCT
Arg
>WENV180276526
OBHU01034018
71745
Bacillota
TAA
Leu
>WENV180276373
OBHU01014521
369392
Bacillota
GCA
Cys
>WENV180275694
OBHU01000098
262414
Bacillota
TGG
Pro
>WENV180275900
OBHU01000781
262414
Bacillota
TGG
Pro
>WENV180276066
OBHU01002348
112135
Bacillota
GTA
Tyr
>WENV180276563
OBHU01038207
257965
Bacillota
TGG
Pro
>WENV180276524
OBHU01034000
64855
Bacillota
CAG
Leu
>WENV180275728
OBHU01000154
65531
Bacillota
CAG
Leu
>WENV180276427
OBHU01022238
159816
Bacillota
CAT
Met
>WENV180276240
OBHU01008067
261470
Bacillota
GTT
Asn
>WENV180276521
OBHU01033462
369391
Bacillota
TCC
Gly
>WENV180276759
OBHU01118757
414080
Bacillota
TTG
Gln
>WENV180276161
OBHU01005058
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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