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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180276584
OBHU01043990
449143
Bacteroidota
TTG
Gln
>WENV180275753
OBHU01000199
161400
Bacteroidota
>WENV180276496
OBHU01030364
369587
Bacteroidota
TTC
Glu
>WENV180276056
OBHU01002179
448691
Bacteroidota
TTG
Gln
>WENV180276037
OBHU01001963
258780
Bacteroidota
>WENV180276344
OBHU01012069
272161
Bacteroidota
CGT
Thr
>WENV180276384
OBHU01016421
261457
Bacteroidota
GCC
Gly
>WENV180276131
OBHU01004070
144955
Bacteroidota
GGG
Pro
>WENV180276221
OBHU01007070
144955
Bacteroidota
GGG
Pro
>WENV180275640
OBHU01000027
259292
Bacteroidota
CGT
Thr
>WENV180276718
OBHU01088953
76307
Bacteroidota
GAG
Leu
>WENV180276758
OBHU01118513
76307
Bacteroidota
GAG
Leu
>WENV180275707
OBHU01000115
261339
Bacteroidota
CCA
Trp
>WENV180276432
OBHU01022567
143081
Bacteroidota
TGG
Pro
>WENV180275710
OBHU01000115
105937
Bacteroidota
GTA
Tyr
>WENV180275706
OBHU01000115
261338
Bacteroidota
GTT
Asn
>WENV180276416
OBHU01021051
452097
Bacteroidota
CTG
Gln
>WENV180276081
OBHU01002632
374505
Bacteroidota
CTC
Glu
>WENV180275662
OBHU01000063
370133
Bacteroidota
CCG
Arg
>WENV180275704
OBHU01000114
105470
Bacteroidota
TAG
Leu
>WENV180275879
OBHU01000618
370665
Bacteroidota
CCG
Arg
>WENV180275684
OBHU01000082
259289
Bacteroidota
CTC
Glu
>WENV180275726
OBHU01000151
261333
Bacteroidota
CCC
Gly
>WENV180276731
OBHU01098616
65114
Bacteroidota
GAG
Leu
>WENV180276501
OBHU01030708
322951
Bacteroidota
TTT
Lys
>WENV180275632
OBHU01000020
22799
Bacteroidota
GGA
Ser
>WENV180276741
OBHU01110378
159953
Bacteroidota
CAT
Met
>WENV180275888
OBHU01000689
20980
Bacteroidota
GGA
Ser
>WENV180276041
OBHU01001989
20980
Bacteroidota
GGA
Ser
>WENV180276068
OBHU01002466
20980
Bacteroidota
GGA
Ser
>WENV180275645
OBHU01000032
448605
Bacteroidota
CTG
Gln
>WENV180275708
OBHU01000115
449089
Bacteroidota
TTG
Gln
>WENV180275647
OBHU01000033
160434
Bacteroidota
GTG
His
>WENV180276460
OBHU01025194
160417
Bacteroidota
GGC
Ala
>WENV180276702
OBHU01080737
166971
Bacteroidota
>WENV180275625
OBHU01000015
58386
Bacteroidota
TGA
Ser
>WENV180275679
OBHU01000077
58386
Bacteroidota
TGA
Ser
>WENV180275911
OBHU01000824
58386
Bacteroidota
TGA
Ser
>WENV180276065
OBHU01002329
58386
Bacteroidota
TGA
Ser
>WENV180276419
OBHU01021520
58386
Bacteroidota
TGA
Ser
>WENV180276763
OBHU01120341
58386
Bacteroidota
TGA
Ser
>WENV180276764
OBHU01120354
58386
Bacteroidota
TGA
Ser
>WENV180276010
OBHU01001534
261335
Bacteroidota
TTT
Lys
>WENV180276705
OBHU01082598
414074
Bacteroidota
>WENV180275705
OBHU01000115
261337
Bacteroidota
>WENV180276768
OBHU01120893
193541
Bacteroidota
GTT
Asn
>WENV180276267
OBHU01009241
216682
Bacteroidota
>WENV180275814
OBHU01000381
160459
Bacteroidota
GGC
Ala
>WENV180276600
OBHU01047714
448601
Bacteroidota
TTG
Gln
>WENV180275709
OBHU01000115
371225
Bacteroidota
TTC
Glu
>WENV180275957
OBHU01001100
324834
Bacteroidota
CCC
Gly
>WENV180276045
OBHU01002052
160435
Bacteroidota
GGC
Ala
>WENV180276119
OBHU01003746
469658
Bacteroidota
CTG
Gln
>WENV180276029
OBHU01001828
371314
Bacteroidota
GCA
Cys
>WENV180276588
OBHU01044640
414056
Bacteroidota
GGT
Thr
>WENV180276630
OBHU01052769
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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