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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180361678
OBNV01163039
205994
Gammaproteobacteria
>WENV180361465
OBNV01035377
451765
Gammaproteobacteria
GCA
Cys
>WENV180361285
OBNV01007027
189345
Gammaproteobacteria
ACG
Arg
>WENV180361530
OBNV01065579
265552
Gammaproteobacteria
GTG
His
>WENV180361409
OBNV01022388
263230
Gammaproteobacteria
TTT
Lys
>WENV180361376
OBNV01017041
262285
Gammaproteobacteria
TGC
Ala
>WENV180361516
OBNV01059328
158479
Gammaproteobacteria
TGG
Pro
>WENV180361388
OBNV01019820
181192
Gammaproteobacteria
GAC
Val
>WENV180361636
OBNV01137522
166420
Gammaproteobacteria
>WENV180361321
OBNV01010127
448815
Gammaproteobacteria
TCC
Gly
>WENV180361217
OBNV01002376
257590
Gammaproteobacteria
GGT
Thr
>WENV180361129
OBNV01000106
260105
Gammaproteobacteria
TTT
Lys
>WENV180361607
OBNV01108516
171915
Gammaproteobacteria
GAC
Val
>WENV180361597
OBNV01105500
161938
Gammaproteobacteria
CGG
Pro
>WENV180361537
OBNV01067833
261154
Gammaproteobacteria
TGC
Ala
>WENV180361513
OBNV01057730
263987
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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