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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180382825
OBOT01098908
373624
Cyanobacteriota
TTG
Gln
>WENV180382802
OBOT01092827
109616
Cyanobacteriota
GTA
Tyr
>WENV180382559
OBOT01019129
339686
Cyanobacteriota
TAC
Val
>WENV180382599
OBOT01024768
25356
Cyanobacteriota
GGA
Ser
>WENV180382474
OBOT01011051
339688
Cyanobacteriota
GAC
Val
>WENV180382836
OBOT01100852
252089
Cyanobacteriota
GTG
His
>WENV180382394
OBOT01004886
148812
Cyanobacteriota
CGG
Pro
>WENV180382972
OBOT01169066
190971
Cyanobacteriota
GTC
Asp
>WENV180382902
OBOT01133294
101255
Cyanobacteriota
TAG
Leu
>WENV180382423
OBOT01006709
11030
Cyanobacteriota
GCT
Ser
>WENV180382803
OBOT01092827
341034
Cyanobacteriota
GGT
Thr
>WENV180383009
OBOT01187319
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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