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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180453864
OBXM01001393
95987
Bacteroidota
CAA
Leu
>WENV180453276
OBXM01000004
339412
Bacteroidota
GGT
Thr
>WENV180453264
OBXM01000002
97336
Bacteroidota
CAG
Leu
>WENV180453269
OBXM01000002
394247
Bacteroidota
CTC
Glu
>WENV180453261
OBXM01000002
136244
Bacteroidota
TAC
Val
>WENV180453468
OBXM01000144
136244
Bacteroidota
TAC
Val
>WENV180453291
OBXM01000008
37076
Bacteroidota
TAA
Leu
>WENV180453265
OBXM01000002
59182
Bacteroidota
GAG
Leu
>WENV180453352
OBXM01000056
196394
Bacteroidota
GTC
Asp
>WENV180453351
OBXM01000056
196394
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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