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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180456656
OBXR01000608
125086
Bacillota
CAA
Leu
>WENV180456520
OBXR01000003
28627
Bacillota
GGA
Ser
>WENV180456507
OBXR01000001
324257
Bacillota
CCA
Trp
>WENV180456713
OBXR01007188
105329
Bacillota
>WENV180456734
OBXR01010307
105329
Bacillota
>WENV180456582
OBXR01000021
160420
Bacillota
CAT
Met
>WENV180456512
OBXR01000001
370121
Bacillota
>WENV180456726
OBXR01008586
383556
Bacillota
GTT
Asn
>WENV180456540
OBXR01000008
18453
Bacillota
GGA
Ser
>WENV180456681
OBXR01003400
125090
Bacillota
TAG
Leu
>WENV180456581
OBXR01000021
259279
Bacillota
GGT
Thr
>WENV180456529
OBXR01000005
160630
Bacillota
CCT
Arg
>WENV180456684
OBXR01003400
218038
Bacillota
TCT
Arg
>WENV180456571
OBXR01000020
18454
Bacillota
GCT
Ser
>WENV180456536
OBXR01000008
160421
Bacillota
TGG
Pro
>WENV180456680
OBXR01003400
258643
Bacillota
TTT
Lys
>WENV180456506
OBXR01000001
41296
Bacillota
TAA
Leu
>WENV180456538
OBXR01000008
160422
Bacillota
TCT
Arg
>WENV180456646
OBXR01000163
18346
Bacillota
TGA
Ser
>WENV180456513
OBXR01000001
124699
Bacillota
CAA
Leu
>WENV180456685
OBXR01003400
266104
Bacillota
CTT
Lys
>WENV180456535
OBXR01000008
96360
Bacillota
GAG
Leu
>WENV180456503
OBXR01000001
259274
Bacillota
GAA
Phe
>WENV180456534
OBXR01000008
259274
Bacillota
GAA
Phe
>WENV180456736
OBXR01010399
386096
Bacillota
>WENV180456679
OBXR01003400
377341
Bacillota
TTG
Gln
>WENV180456671
OBXR01002190
369508
Bacillota
>WENV180456509
OBXR01000001
105465
Bacillota
TAG
Leu
>WENV180456511
OBXR01000001
259275
Bacillota
CTT
Lys
>WENV180456678
OBXR01003400
314393
Bacillota
GTG
His
>WENV180456668
OBXR01001624
328305
Bacillota
>WENV180456655
OBXR01000556
258600
Bacillota
TGC
Ala
>WENV180456539
OBXR01000008
18455
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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