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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180456543
OBXR01000012
68831
Gammaproteobacteria
TAA
Leu
>WENV180456544
OBXR01000012
68831
Gammaproteobacteria
TAA
Leu
>WENV180456545
OBXR01000012
68831
Gammaproteobacteria
TAA
Leu
>WENV180456556
OBXR01000017
257463
Gammaproteobacteria
TTT
Lys
>WENV180456557
OBXR01000017
257463
Gammaproteobacteria
TTT
Lys
>WENV180456558
OBXR01000017
257463
Gammaproteobacteria
TTT
Lys
>WENV180456569
OBXR01000019
257463
Gammaproteobacteria
TTT
Lys
>WENV180456570
OBXR01000019
257463
Gammaproteobacteria
TTT
Lys
>WENV180456589
OBXR01000022
257466
Gammaproteobacteria
GTT
Asn
>WENV180456590
OBXR01000022
257466
Gammaproteobacteria
GTT
Asn
>WENV180456591
OBXR01000022
257466
Gammaproteobacteria
GTT
Asn
>WENV180456592
OBXR01000022
257466
Gammaproteobacteria
GTT
Asn
>WENV180456546
OBXR01000012
159306
Gammaproteobacteria
GAC
Val
>WENV180456547
OBXR01000012
159306
Gammaproteobacteria
GAC
Val
>WENV180456595
OBXR01000026
49734
Gammaproteobacteria
GGA
Ser
>WENV180456527
OBXR01000004
212156
Gammaproteobacteria
>WENV180456708
OBXR01006657
159483
Gammaproteobacteria
TGG
Pro
>WENV180456605
OBXR01000035
177110
Gammaproteobacteria
ACG
Arg
>WENV180456606
OBXR01000035
177110
Gammaproteobacteria
ACG
Arg
>WENV180456607
OBXR01000035
177110
Gammaproteobacteria
ACG
Arg
>WENV180456630
OBXR01000045
49834
Gammaproteobacteria
TGA
Ser
>WENV180456632
OBXR01000045
49834
Gammaproteobacteria
TGA
Ser
>WENV180456609
OBXR01000037
160758
Gammaproteobacteria
GGG
Pro
>WENV180456553
OBXR01000017
257462
Gammaproteobacteria
TAC
Val
>WENV180456554
OBXR01000017
257462
Gammaproteobacteria
TAC
Val
>WENV180456555
OBXR01000017
257462
Gammaproteobacteria
TAC
Val
>WENV180456559
OBXR01000017
257462
Gammaproteobacteria
TAC
Val
>WENV180456588
OBXR01000022
259630
Gammaproteobacteria
>WENV180456701
OBXR01004797
260837
Gammaproteobacteria
CTT
Lys
>WENV180456550
OBXR01000017
370318
Gammaproteobacteria
CCT
Arg
>WENV180456629
OBXR01000044
4435
Gammaproteobacteria
>WENV180456718
OBXR01007461
3830
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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